Gene : Sobic.006G134900 S. bicolor v3.1.1
Defline:  (1 of 3) K10808 - ribonucleoside-diphosphate reductase subunit M2 (RRM2) Genomic Order:  1408
Name:  ? Sobic.006G134900 Secondary Identifier:  ? PAC:37946746
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Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6545 Sorghum bicolor pathologic  
Sbicolor PWY-7184 Sorghum bicolor pathologic  
Sbicolor PWY-7210 Sorghum bicolor pathologic  
Sbicolor PWY-7211 Sorghum bicolor pathologic  
Sbicolor PWY-7226 Sorghum bicolor pathologic  
Sbicolor PWY-7227 Sorghum bicolor pathologic  
Sbicolor PWY-7228 Sorghum bicolor pathologic  
Sbicolor PWY-7229 Sorghum bicolor pathologic  
Sbicolor PWY-841 Sorghum bicolor pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G134900 0.5kb upstream 0.5kb upstream 2323 true Chr06: 49803511-49805833 Sorghum bicolor
Sobic.006G134900 0.5kb upstream 0.5kb upstream 500 false Chr06: 49805334-49805833 Sorghum bicolor
Sobic.006G134900 0.5kb downstream 0.5kb downstream 2323 true Chr06: 49803011-49805333 Sorghum bicolor
Sobic.006G134900 0.5kb downstream 0.5kb downstream 500 false Chr06: 49803011-49803510 Sorghum bicolor
Sobic.006G134900 1.0kb upstream 1.0kb upstream 2823 true Chr06: 49803511-49806333 Sorghum bicolor
Sobic.006G134900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49805334-49806333 Sorghum bicolor
Sobic.006G134900 1.0kb downstream 1.0kb downstream 2823 true Chr06: 49802511-49805333 Sorghum bicolor
Sobic.006G134900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49802511-49803510 Sorghum bicolor
Sobic.006G134900 2.0kb upstream 2.0kb upstream 3823 true Chr06: 49803511-49807333 Sorghum bicolor
Sobic.006G134900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49805334-49807333 Sorghum bicolor
Sobic.006G134900 2.0kb downstream 2.0kb downstream 3823 true Chr06: 49801511-49805333 Sorghum bicolor
Sobic.006G134900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49801511-49803510 Sorghum bicolor
Sobic.006G134900 5.0kb upstream 5.0kb upstream 6823 true Chr06: 49803511-49810333 Sorghum bicolor
Sobic.006G134900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49805334-49810333 Sorghum bicolor
Sobic.006G134900 5.0kb downstream 5.0kb downstream 6823 true Chr06: 49798511-49805333 Sorghum bicolor
Sobic.006G134900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49798511-49803510 Sorghum bicolor
Sobic.006G134900 10.0kb upstream 10.0kb upstream 11823 true Chr06: 49803511-49815333 Sorghum bicolor
Sobic.006G134900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49805334-49815333 Sorghum bicolor
Sobic.006G134900 10.0kb downstream 10.0kb downstream 11823 true Chr06: 49793511-49805333 Sorghum bicolor
Sobic.006G134900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49793511-49803510 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193938 5267 Panicoideae View MSA
124585111 5269 Grass View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.426       High
cufflinks 0.139       Low
cufflinks 0.056     Low Low
cufflinks 0.123       Low
cufflinks 1.766        
cufflinks 1.631        
cufflinks 2.529        
cufflinks 0.286        
cufflinks 0.707        
cufflinks 0.761        
cufflinks 1.262        
cufflinks 1.272        
cufflinks 0.394        
cufflinks 1.815        
cufflinks 1.749        
cufflinks 0.078     Low Low
cufflinks 2.275        
cufflinks 2.36        
cufflinks 0.548        
cufflinks 1.483        
cufflinks 4.663       High
cufflinks 2.546        
cufflinks 1.486        
cufflinks 1.8        
cufflinks 0.154       Low
cufflinks 0.091       Low
cufflinks 0.396        
cufflinks 0.03     Low Low
cufflinks 0.383        
cufflinks 3.714       High

0 Strain