Gene : Sobic.006G134800 S. bicolor v3.1.1
Defline:  (1 of 1) K17888 - ubiquitin-like-conjugating enzyme ATG10, animal type (ATG10L, ATG10) Genomic Order:  1407
Name:  ? Sobic.006G134800 Secondary Identifier:  ? PAC:37947333
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G134800 0.5kb upstream 0.5kb upstream 1989 true Chr06: 49801437-49803425 Sorghum bicolor
Sobic.006G134800 0.5kb upstream 0.5kb upstream 500 false Chr06: 49802926-49803425 Sorghum bicolor
Sobic.006G134800 0.5kb downstream 0.5kb downstream 1989 true Chr06: 49800937-49802925 Sorghum bicolor
Sobic.006G134800 0.5kb downstream 0.5kb downstream 500 false Chr06: 49800937-49801436 Sorghum bicolor
Sobic.006G134800 1.0kb upstream 1.0kb upstream 2489 true Chr06: 49801437-49803925 Sorghum bicolor
Sobic.006G134800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49802926-49803925 Sorghum bicolor
Sobic.006G134800 1.0kb downstream 1.0kb downstream 2489 true Chr06: 49800437-49802925 Sorghum bicolor
Sobic.006G134800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49800437-49801436 Sorghum bicolor
Sobic.006G134800 2.0kb upstream 2.0kb upstream 3489 true Chr06: 49801437-49804925 Sorghum bicolor
Sobic.006G134800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49802926-49804925 Sorghum bicolor
Sobic.006G134800 2.0kb downstream 2.0kb downstream 3489 true Chr06: 49799437-49802925 Sorghum bicolor
Sobic.006G134800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49799437-49801436 Sorghum bicolor
Sobic.006G134800 5.0kb upstream 5.0kb upstream 6489 true Chr06: 49801437-49807925 Sorghum bicolor
Sobic.006G134800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49802926-49807925 Sorghum bicolor
Sobic.006G134800 5.0kb downstream 5.0kb downstream 6489 true Chr06: 49796437-49802925 Sorghum bicolor
Sobic.006G134800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49796437-49801436 Sorghum bicolor
Sobic.006G134800 10.0kb upstream 10.0kb upstream 11489 true Chr06: 49801437-49812925 Sorghum bicolor
Sobic.006G134800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49802926-49812925 Sorghum bicolor
Sobic.006G134800 10.0kb downstream 10.0kb downstream 11489 true Chr06: 49791437-49802925 Sorghum bicolor
Sobic.006G134800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49791437-49801436 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185940 5267 Panicoideae View MSA
124579019 5269 Grass View MSA
122045044 5273 Angiosperm View MSA
121344822 5274 Embryophyte View MSA
123380107 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.482     High High
cufflinks 2.768       Low
cufflinks 9.895     High  
cufflinks 13.893     High High
cufflinks 7.392        
cufflinks 11.163        
cufflinks 4.576       Low
cufflinks 2.934       Low
cufflinks 16.632     High High
cufflinks 13.897     High High
cufflinks 7.546        
cufflinks 11.339        
cufflinks 10.086        
cufflinks 11.461        
cufflinks 9.692        
cufflinks 6.71        
cufflinks 4.13       Low
cufflinks 4.45       Low
cufflinks 3.871       Low
cufflinks 7.497        
cufflinks 15.018     High High
cufflinks 9.663        
cufflinks 9.2        
cufflinks 9.347        
cufflinks 6.266        
cufflinks 2.43       Low
cufflinks 16.966     High High
cufflinks 4.811        
cufflinks 3.544       Low
cufflinks 9.738        

0 Strain