Gene : Sobic.006G138100 S. bicolor v3.1.1
Defline:  (1 of 3) K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Genomic Order:  1442
Name:  ? Sobic.006G138100 Secondary Identifier:  ? PAC:37946000
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G138100 0.5kb upstream 0.5kb upstream 2925 true Chr06: 50028162-50031086 Sorghum bicolor
Sobic.006G138100 0.5kb upstream 0.5kb upstream 500 false Chr06: 50030587-50031086 Sorghum bicolor
Sobic.006G138100 0.5kb downstream 0.5kb downstream 2925 true Chr06: 50027662-50030586 Sorghum bicolor
Sobic.006G138100 0.5kb downstream 0.5kb downstream 500 false Chr06: 50027662-50028161 Sorghum bicolor
Sobic.006G138100 1.0kb upstream 1.0kb upstream 3425 true Chr06: 50028162-50031586 Sorghum bicolor
Sobic.006G138100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50030587-50031586 Sorghum bicolor
Sobic.006G138100 1.0kb downstream 1.0kb downstream 3425 true Chr06: 50027162-50030586 Sorghum bicolor
Sobic.006G138100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50027162-50028161 Sorghum bicolor
Sobic.006G138100 2.0kb upstream 2.0kb upstream 4425 true Chr06: 50028162-50032586 Sorghum bicolor
Sobic.006G138100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50030587-50032586 Sorghum bicolor
Sobic.006G138100 2.0kb downstream 2.0kb downstream 4425 true Chr06: 50026162-50030586 Sorghum bicolor
Sobic.006G138100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50026162-50028161 Sorghum bicolor
Sobic.006G138100 5.0kb upstream 5.0kb upstream 7425 true Chr06: 50028162-50035586 Sorghum bicolor
Sobic.006G138100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50030587-50035586 Sorghum bicolor
Sobic.006G138100 5.0kb downstream 5.0kb downstream 7425 true Chr06: 50023162-50030586 Sorghum bicolor
Sobic.006G138100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50023162-50028161 Sorghum bicolor
Sobic.006G138100 10.0kb upstream 10.0kb upstream 12425 true Chr06: 50028162-50040586 Sorghum bicolor
Sobic.006G138100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50030587-50040586 Sorghum bicolor
Sobic.006G138100 10.0kb downstream 10.0kb downstream 12425 true Chr06: 50018162-50030586 Sorghum bicolor
Sobic.006G138100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50018162-50028161 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122200031 5267 Panicoideae View MSA
124580462 5269 Grass View MSA
122044220 5273 Angiosperm View MSA
121344694 5274 Embryophyte View MSA
123428242 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.704     High High
cufflinks 0.634       Low
cufflinks 3.841        
cufflinks 8.582        
cufflinks 15.654     High  
cufflinks 10.995        
cufflinks 12.67     High  
cufflinks 2.137       Low
cufflinks 9.872        
cufflinks 9.75        
cufflinks 23.777     High  
cufflinks 15.067     High  
cufflinks 6.019        
cufflinks 17.576     High  
cufflinks 7.822        
cufflinks 2.239       Low
cufflinks 14.658     High  
cufflinks 14.592     High  
cufflinks 3.366       Low
cufflinks 12.025     High  
cufflinks 32.371     High High
cufflinks 32.643     High High
cufflinks 23.014     High  
cufflinks 26.532     High  
cufflinks 1.453       Low
cufflinks 0.477       Low
cufflinks 13.586     High  
cufflinks 66.935     High High
cufflinks 11.537     High  
cufflinks 12.833     High  

0 Strain