Gene : Sobic.006G138400 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR24006//PTHR24006:SF451 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Genomic Order:  1445
Name:  ? Sobic.006G138400 Secondary Identifier:  ? PAC:37946542
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G138400 0.5kb upstream 0.5kb upstream 13244 true Chr06: 50051884-50065127 Sorghum bicolor
Sobic.006G138400 0.5kb upstream 0.5kb upstream 500 false Chr06: 50064628-50065127 Sorghum bicolor
Sobic.006G138400 0.5kb downstream 0.5kb downstream 13244 true Chr06: 50051384-50064627 Sorghum bicolor
Sobic.006G138400 0.5kb downstream 0.5kb downstream 500 false Chr06: 50051384-50051883 Sorghum bicolor
Sobic.006G138400 1.0kb upstream 1.0kb upstream 13744 true Chr06: 50051884-50065627 Sorghum bicolor
Sobic.006G138400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50064628-50065627 Sorghum bicolor
Sobic.006G138400 1.0kb downstream 1.0kb downstream 13744 true Chr06: 50050884-50064627 Sorghum bicolor
Sobic.006G138400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50050884-50051883 Sorghum bicolor
Sobic.006G138400 2.0kb upstream 2.0kb upstream 14744 true Chr06: 50051884-50066627 Sorghum bicolor
Sobic.006G138400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50064628-50066627 Sorghum bicolor
Sobic.006G138400 2.0kb downstream 2.0kb downstream 14744 true Chr06: 50049884-50064627 Sorghum bicolor
Sobic.006G138400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50049884-50051883 Sorghum bicolor
Sobic.006G138400 5.0kb upstream 5.0kb upstream 17744 true Chr06: 50051884-50069627 Sorghum bicolor
Sobic.006G138400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50064628-50069627 Sorghum bicolor
Sobic.006G138400 5.0kb downstream 5.0kb downstream 17744 true Chr06: 50046884-50064627 Sorghum bicolor
Sobic.006G138400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50046884-50051883 Sorghum bicolor
Sobic.006G138400 10.0kb upstream 10.0kb upstream 22744 true Chr06: 50051884-50074627 Sorghum bicolor
Sobic.006G138400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50064628-50074627 Sorghum bicolor
Sobic.006G138400 10.0kb downstream 10.0kb downstream 22744 true Chr06: 50041884-50064627 Sorghum bicolor
Sobic.006G138400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50041884-50051883 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181050 5267 Panicoideae View MSA
124580349 5269 Grass View MSA
122042006 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121344992 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.077       Low
cufflinks 0.749       Low
cufflinks 2.364        
cufflinks 4.935       High
cufflinks 3.66        
cufflinks 5.218       High
cufflinks 1.133       Low
cufflinks 1.241       Low
cufflinks 4.498        
cufflinks 5.261       High
cufflinks 2.78        
cufflinks 4.727       High
cufflinks 5.375       High
cufflinks 2.424        
cufflinks 2.708        
cufflinks 3.311        
cufflinks 0.891       Low
cufflinks 1.069       Low
cufflinks 4.585       High
cufflinks 2.162        
cufflinks 3.643        
cufflinks 1.931        
cufflinks 2.076        
cufflinks 1.788        
cufflinks 2.469        
cufflinks 1.061       Low
cufflinks 4.329        
cufflinks 1.091       Low
cufflinks 0.997       Low
cufflinks 2.498        

0 Strain