Gene : Sobic.006G138300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12294 - EF HAND DOMAIN FAMILY A1,A2-RELATED Genomic Order:  1444
Name:  ? Sobic.006G138300 Secondary Identifier:  ? PAC:37949054
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G138300 0.5kb upstream 0.5kb upstream 6000 true Chr06: 50046618-50052617 Sorghum bicolor
Sobic.006G138300 0.5kb upstream 0.5kb upstream 500 false Chr06: 50046618-50047117 Sorghum bicolor
Sobic.006G138300 0.5kb downstream 0.5kb downstream 6000 true Chr06: 50047118-50053117 Sorghum bicolor
Sobic.006G138300 0.5kb downstream 0.5kb downstream 500 false Chr06: 50052618-50053117 Sorghum bicolor
Sobic.006G138300 1.0kb upstream 1.0kb upstream 6500 true Chr06: 50046118-50052617 Sorghum bicolor
Sobic.006G138300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50046118-50047117 Sorghum bicolor
Sobic.006G138300 1.0kb downstream 1.0kb downstream 6500 true Chr06: 50047118-50053617 Sorghum bicolor
Sobic.006G138300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50052618-50053617 Sorghum bicolor
Sobic.006G138300 2.0kb upstream 2.0kb upstream 7500 true Chr06: 50045118-50052617 Sorghum bicolor
Sobic.006G138300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50045118-50047117 Sorghum bicolor
Sobic.006G138300 2.0kb downstream 2.0kb downstream 7500 true Chr06: 50047118-50054617 Sorghum bicolor
Sobic.006G138300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50052618-50054617 Sorghum bicolor
Sobic.006G138300 5.0kb upstream 5.0kb upstream 10500 true Chr06: 50042118-50052617 Sorghum bicolor
Sobic.006G138300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50042118-50047117 Sorghum bicolor
Sobic.006G138300 5.0kb downstream 5.0kb downstream 10500 true Chr06: 50047118-50057617 Sorghum bicolor
Sobic.006G138300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50052618-50057617 Sorghum bicolor
Sobic.006G138300 10.0kb upstream 10.0kb upstream 15500 true Chr06: 50037118-50052617 Sorghum bicolor
Sobic.006G138300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50037118-50047117 Sorghum bicolor
Sobic.006G138300 10.0kb downstream 10.0kb downstream 15500 true Chr06: 50047118-50062617 Sorghum bicolor
Sobic.006G138300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50052618-50062617 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193315 5267 Panicoideae View MSA
124571834 5269 Grass View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.495       Low
cufflinks 14.226     High  
cufflinks 48.079     High High
cufflinks 54.202     High High
cufflinks 66.123     High High
cufflinks 25.066     High  
cufflinks 4.882       Low
cufflinks 11.2     High  
cufflinks 28.026     High  
cufflinks 21.028     High  
cufflinks 22.003     High  
cufflinks 6.475       Low
cufflinks 55.744     High High
cufflinks 10.906        
cufflinks 42.064     High High
cufflinks 18.161     High  
cufflinks 5.338       Low
cufflinks 5.556       Low
cufflinks 23.47     High  
cufflinks 6.721       Low
cufflinks 5.557       Low
cufflinks 11.727        
cufflinks 7.088       Low
cufflinks 6.979       Low
cufflinks 11.174     High  
cufflinks 9.773     High  
cufflinks 33.681     High  
cufflinks 3.085       Low
cufflinks 10.32        
cufflinks 25.896     High  

0 Strain