Gene : Sobic.002G260700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23180//PTHR23180:SF284 - CENTAURIN/ARF // ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD3 Genomic Order:  2662
Name:  ? Sobic.002G260700 Secondary Identifier:  ? PAC:37949847
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G260700 0.5kb upstream 0.5kb upstream 7507 true Chr02: 64577954-64585460 Sorghum bicolor
Sobic.002G260700 0.5kb upstream 0.5kb upstream 500 false Chr02: 64584961-64585460 Sorghum bicolor
Sobic.002G260700 0.5kb downstream 0.5kb downstream 7507 true Chr02: 64577454-64584960 Sorghum bicolor
Sobic.002G260700 0.5kb downstream 0.5kb downstream 500 false Chr02: 64577454-64577953 Sorghum bicolor
Sobic.002G260700 1.0kb upstream 1.0kb upstream 8007 true Chr02: 64577954-64585960 Sorghum bicolor
Sobic.002G260700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 64584961-64585960 Sorghum bicolor
Sobic.002G260700 1.0kb downstream 1.0kb downstream 8007 true Chr02: 64576954-64584960 Sorghum bicolor
Sobic.002G260700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 64576954-64577953 Sorghum bicolor
Sobic.002G260700 2.0kb upstream 2.0kb upstream 9007 true Chr02: 64577954-64586960 Sorghum bicolor
Sobic.002G260700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 64584961-64586960 Sorghum bicolor
Sobic.002G260700 2.0kb downstream 2.0kb downstream 9007 true Chr02: 64575954-64584960 Sorghum bicolor
Sobic.002G260700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 64575954-64577953 Sorghum bicolor
Sobic.002G260700 5.0kb upstream 5.0kb upstream 12007 true Chr02: 64577954-64589960 Sorghum bicolor
Sobic.002G260700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 64584961-64589960 Sorghum bicolor
Sobic.002G260700 5.0kb downstream 5.0kb downstream 12007 true Chr02: 64572954-64584960 Sorghum bicolor
Sobic.002G260700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 64572954-64577953 Sorghum bicolor
Sobic.002G260700 10.0kb upstream 10.0kb upstream 17007 true Chr02: 64577954-64594960 Sorghum bicolor
Sobic.002G260700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 64584961-64594960 Sorghum bicolor
Sobic.002G260700 10.0kb downstream 10.0kb downstream 17007 true Chr02: 64567954-64584960 Sorghum bicolor
Sobic.002G260700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 64567954-64577953 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177509 5267 Panicoideae View MSA
124576350 5269 Grass View MSA
122045585 5273 Angiosperm View MSA
121349656 5274 Embryophyte View MSA
123428285 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.497        
cufflinks 0.678       Low
cufflinks 2.259       Low
cufflinks 1.616       Low
cufflinks 22.049     High High
cufflinks 10.267        
cufflinks 9.389        
cufflinks 2.225       Low
cufflinks 13.698     High  
cufflinks 13.594     High  
cufflinks 6.677        
cufflinks 8.952        
cufflinks 36.746     High High
cufflinks 6.934        
cufflinks 11.552        
cufflinks 0.745       Low
cufflinks 8.391        
cufflinks 9.367        
cufflinks 3.979        
cufflinks 8.59        
cufflinks 30.818     High High
cufflinks 9.279        
cufflinks 9.759        
cufflinks 10.555        
cufflinks 0.913       Low
cufflinks 0.607       Low
cufflinks 5.596        
cufflinks 1.41       Low
cufflinks 6.05        
cufflinks 12.884     High  

0 Strain