Gene : Sobic.002G257750 S. bicolor v3.1.1
Defline:  (1 of 1) PF14968 - Coiled coil protein 84 (CCDC84) Genomic Order:  2632
Name:  ? Sobic.002G257750 Secondary Identifier:  ? PAC:37954230
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G257750 0.5kb upstream 0.5kb upstream 3873 true Chr02: 64349841-64353713 Sorghum bicolor
Sobic.002G257750 0.5kb upstream 0.5kb upstream 500 false Chr02: 64349841-64350340 Sorghum bicolor
Sobic.002G257750 0.5kb downstream 0.5kb downstream 3873 true Chr02: 64350341-64354213 Sorghum bicolor
Sobic.002G257750 0.5kb downstream 0.5kb downstream 500 false Chr02: 64353714-64354213 Sorghum bicolor
Sobic.002G257750 1.0kb upstream 1.0kb upstream 4373 true Chr02: 64349341-64353713 Sorghum bicolor
Sobic.002G257750 1.0kb upstream 1.0kb upstream 1000 false Chr02: 64349341-64350340 Sorghum bicolor
Sobic.002G257750 1.0kb downstream 1.0kb downstream 4373 true Chr02: 64350341-64354713 Sorghum bicolor
Sobic.002G257750 1.0kb downstream 1.0kb downstream 1000 false Chr02: 64353714-64354713 Sorghum bicolor
Sobic.002G257750 2.0kb upstream 2.0kb upstream 5373 true Chr02: 64348341-64353713 Sorghum bicolor
Sobic.002G257750 2.0kb upstream 2.0kb upstream 2000 false Chr02: 64348341-64350340 Sorghum bicolor
Sobic.002G257750 2.0kb downstream 2.0kb downstream 5373 true Chr02: 64350341-64355713 Sorghum bicolor
Sobic.002G257750 2.0kb downstream 2.0kb downstream 2000 false Chr02: 64353714-64355713 Sorghum bicolor
Sobic.002G257750 5.0kb upstream 5.0kb upstream 8373 true Chr02: 64345341-64353713 Sorghum bicolor
Sobic.002G257750 5.0kb upstream 5.0kb upstream 5000 false Chr02: 64345341-64350340 Sorghum bicolor
Sobic.002G257750 5.0kb downstream 5.0kb downstream 8373 true Chr02: 64350341-64358713 Sorghum bicolor
Sobic.002G257750 5.0kb downstream 5.0kb downstream 5000 false Chr02: 64353714-64358713 Sorghum bicolor
Sobic.002G257750 10.0kb upstream 10.0kb upstream 13373 true Chr02: 64340341-64353713 Sorghum bicolor
Sobic.002G257750 10.0kb upstream 10.0kb upstream 10000 false Chr02: 64340341-64350340 Sorghum bicolor
Sobic.002G257750 10.0kb downstream 10.0kb downstream 13373 true Chr02: 64350341-64363713 Sorghum bicolor
Sobic.002G257750 10.0kb downstream 10.0kb downstream 10000 false Chr02: 64353714-64363713 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191260 5267 Panicoideae View MSA
124576144 5269 Grass View MSA
122044332 5273 Angiosperm View MSA
121347668 5274 Embryophyte View MSA
123380595 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.811       Low
cufflinks 6.404     High High
cufflinks 8.48       High
cufflinks 7.796       High
cufflinks 2.706        
cufflinks 5.941       High
cufflinks 2.985        
cufflinks 4.595        
cufflinks 3.323        
cufflinks 3.984        
cufflinks 2.383        
cufflinks 3.265        
cufflinks 3.707        
cufflinks 1.94        
cufflinks 4.078        
cufflinks 4.413        
cufflinks 2.644        
cufflinks 2.506        
cufflinks 4.08        
cufflinks 3.317        
cufflinks 3.904        
cufflinks 1.665       Low
cufflinks 1.729       Low
cufflinks 1.7       Low
cufflinks 10.494     High High
cufflinks 8.969     High High
cufflinks 3.942        
cufflinks 1.067       Low
cufflinks 3.84        
cufflinks 4.166        

0 Strain