Gene : Sobic.006G142600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23180//PTHR23180:SF243 - CENTAURIN/ARF // SUBFAMILY NOT NAMED Genomic Order:  1495
Name:  ? Sobic.006G142600 Secondary Identifier:  ? PAC:37946047
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G142600 0.5kb upstream 0.5kb upstream 10967 true Chr06: 50461621-50472587 Sorghum bicolor
Sobic.006G142600 0.5kb upstream 0.5kb upstream 500 false Chr06: 50461621-50462120 Sorghum bicolor
Sobic.006G142600 0.5kb downstream 0.5kb downstream 10967 true Chr06: 50462121-50473087 Sorghum bicolor
Sobic.006G142600 0.5kb downstream 0.5kb downstream 500 false Chr06: 50472588-50473087 Sorghum bicolor
Sobic.006G142600 1.0kb upstream 1.0kb upstream 11467 true Chr06: 50461121-50472587 Sorghum bicolor
Sobic.006G142600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50461121-50462120 Sorghum bicolor
Sobic.006G142600 1.0kb downstream 1.0kb downstream 11467 true Chr06: 50462121-50473587 Sorghum bicolor
Sobic.006G142600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50472588-50473587 Sorghum bicolor
Sobic.006G142600 2.0kb upstream 2.0kb upstream 12467 true Chr06: 50460121-50472587 Sorghum bicolor
Sobic.006G142600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50460121-50462120 Sorghum bicolor
Sobic.006G142600 2.0kb downstream 2.0kb downstream 12467 true Chr06: 50462121-50474587 Sorghum bicolor
Sobic.006G142600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50472588-50474587 Sorghum bicolor
Sobic.006G142600 5.0kb upstream 5.0kb upstream 15467 true Chr06: 50457121-50472587 Sorghum bicolor
Sobic.006G142600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50457121-50462120 Sorghum bicolor
Sobic.006G142600 5.0kb downstream 5.0kb downstream 15467 true Chr06: 50462121-50477587 Sorghum bicolor
Sobic.006G142600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50472588-50477587 Sorghum bicolor
Sobic.006G142600 10.0kb upstream 10.0kb upstream 20467 true Chr06: 50452121-50472587 Sorghum bicolor
Sobic.006G142600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50452121-50462120 Sorghum bicolor
Sobic.006G142600 10.0kb downstream 10.0kb downstream 20467 true Chr06: 50462121-50482587 Sorghum bicolor
Sobic.006G142600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50472588-50482587 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181618 5267 Panicoideae View MSA
124568585 5269 Grass View MSA
122043769 5273 Angiosperm View MSA
121350086 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.055     Low Low
cufflinks 6.986     High High
cufflinks 5.819       High
cufflinks 2.35        
cufflinks 1.093        
cufflinks 3.801        
cufflinks 2.845        
cufflinks 4.424       High
cufflinks 1.321        
cufflinks 1.468        
cufflinks 0.482        
cufflinks 0.653        
cufflinks 2.264        
cufflinks 0.368       Low
cufflinks 2.144        
cufflinks 5.784       High
cufflinks 2.619        
cufflinks 3.135        
cufflinks 4.828       High
cufflinks 2.494        
cufflinks 1.164        
cufflinks 0.272       Low
cufflinks 0.323       Low
cufflinks 0.308       Low
cufflinks 6.27       High
cufflinks 6.753     High High
cufflinks 0.937        
cufflinks 0.069     Low Low
cufflinks 3.25        
cufflinks 1.784        

0 Strain