Gene : Sobic.002G253100 S. bicolor v3.1.1
Defline:  (1 of 2) K02959 - small subunit ribosomal protein S16 (RP-S16, MRPS16, rpsP) Genomic Order:  2584
Name:  ? Sobic.002G253100 Secondary Identifier:  ? PAC:37952758
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G253100 0.5kb upstream 0.5kb upstream 3589 true Chr02: 63949460-63953048 Sorghum bicolor
Sobic.002G253100 0.5kb upstream 0.5kb upstream 500 false Chr02: 63949460-63949959 Sorghum bicolor
Sobic.002G253100 0.5kb downstream 0.5kb downstream 3589 true Chr02: 63949960-63953548 Sorghum bicolor
Sobic.002G253100 0.5kb downstream 0.5kb downstream 500 false Chr02: 63953049-63953548 Sorghum bicolor
Sobic.002G253100 1.0kb upstream 1.0kb upstream 4089 true Chr02: 63948960-63953048 Sorghum bicolor
Sobic.002G253100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 63948960-63949959 Sorghum bicolor
Sobic.002G253100 1.0kb downstream 1.0kb downstream 4089 true Chr02: 63949960-63954048 Sorghum bicolor
Sobic.002G253100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 63953049-63954048 Sorghum bicolor
Sobic.002G253100 2.0kb upstream 2.0kb upstream 5089 true Chr02: 63947960-63953048 Sorghum bicolor
Sobic.002G253100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 63947960-63949959 Sorghum bicolor
Sobic.002G253100 2.0kb downstream 2.0kb downstream 5089 true Chr02: 63949960-63955048 Sorghum bicolor
Sobic.002G253100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 63953049-63955048 Sorghum bicolor
Sobic.002G253100 5.0kb upstream 5.0kb upstream 8089 true Chr02: 63944960-63953048 Sorghum bicolor
Sobic.002G253100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 63944960-63949959 Sorghum bicolor
Sobic.002G253100 5.0kb downstream 5.0kb downstream 8089 true Chr02: 63949960-63958048 Sorghum bicolor
Sobic.002G253100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 63953049-63958048 Sorghum bicolor
Sobic.002G253100 10.0kb upstream 10.0kb upstream 13089 true Chr02: 63939960-63953048 Sorghum bicolor
Sobic.002G253100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 63939960-63949959 Sorghum bicolor
Sobic.002G253100 10.0kb downstream 10.0kb downstream 13089 true Chr02: 63949960-63963048 Sorghum bicolor
Sobic.002G253100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 63953049-63963048 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182751 5267 Panicoideae View MSA
124580342 5269 Grass View MSA
122051162 5273 Angiosperm View MSA
121348917 5274 Embryophyte View MSA
123426601 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.138     High High
cufflinks 0.529       Low
cufflinks 2.133        
cufflinks 5.784        
cufflinks 3.064        
cufflinks 4.212        
cufflinks 3.832        
cufflinks 1.471       Low
cufflinks 3.916        
cufflinks 4.281        
cufflinks 4.018        
cufflinks 3.152        
cufflinks 2.267        
cufflinks 3.722        
cufflinks 2.785        
cufflinks 1.91        
cufflinks 4.189        
cufflinks 4.367        
cufflinks 1.037       Low
cufflinks 4.325        
cufflinks 4.185        
cufflinks 6.011       High
cufflinks 4.311        
cufflinks 4.875        
cufflinks 1.144       Low
cufflinks 0.643       Low
cufflinks 2.389        
cufflinks 6.892       High
cufflinks 4.318        
cufflinks 3.87        

0 Strain