Gene : Sobic.006G148200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11183//PTHR11183:SF39 - GLYCOGENIN // PROTEIN GYG-1, ISOFORM A Genomic Order:  1556
Name:  ? Sobic.006G148200 Secondary Identifier:  ? PAC:37947515
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G148200 0.5kb upstream 0.5kb upstream 7247 true Chr06: 50981113-50988359 Sorghum bicolor
Sobic.006G148200 0.5kb upstream 0.5kb upstream 500 false Chr06: 50981113-50981612 Sorghum bicolor
Sobic.006G148200 0.5kb downstream 0.5kb downstream 7247 true Chr06: 50981613-50988859 Sorghum bicolor
Sobic.006G148200 0.5kb downstream 0.5kb downstream 500 false Chr06: 50988360-50988859 Sorghum bicolor
Sobic.006G148200 1.0kb upstream 1.0kb upstream 7747 true Chr06: 50980613-50988359 Sorghum bicolor
Sobic.006G148200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50980613-50981612 Sorghum bicolor
Sobic.006G148200 1.0kb downstream 1.0kb downstream 7747 true Chr06: 50981613-50989359 Sorghum bicolor
Sobic.006G148200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50988360-50989359 Sorghum bicolor
Sobic.006G148200 2.0kb upstream 2.0kb upstream 8747 true Chr06: 50979613-50988359 Sorghum bicolor
Sobic.006G148200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50979613-50981612 Sorghum bicolor
Sobic.006G148200 2.0kb downstream 2.0kb downstream 8747 true Chr06: 50981613-50990359 Sorghum bicolor
Sobic.006G148200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50988360-50990359 Sorghum bicolor
Sobic.006G148200 5.0kb upstream 5.0kb upstream 11747 true Chr06: 50976613-50988359 Sorghum bicolor
Sobic.006G148200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50976613-50981612 Sorghum bicolor
Sobic.006G148200 5.0kb downstream 5.0kb downstream 11747 true Chr06: 50981613-50993359 Sorghum bicolor
Sobic.006G148200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50988360-50993359 Sorghum bicolor
Sobic.006G148200 10.0kb upstream 10.0kb upstream 16747 true Chr06: 50971613-50988359 Sorghum bicolor
Sobic.006G148200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50971613-50981612 Sorghum bicolor
Sobic.006G148200 10.0kb downstream 10.0kb downstream 16747 true Chr06: 50981613-50998359 Sorghum bicolor
Sobic.006G148200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50988360-50998359 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181078 5267 Panicoideae View MSA
124581080 5269 Grass View MSA
122043936 5273 Angiosperm View MSA
121344123 5274 Embryophyte View MSA
123425544 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.744        
cufflinks 0.545       Low
cufflinks 1.285        
cufflinks 2.639        
cufflinks 1.522        
cufflinks 1.367        
cufflinks 1.216        
cufflinks 0.684       Low
cufflinks 2.702        
cufflinks 2.676        
cufflinks 3.458       High
cufflinks 3.433       High
cufflinks 1.734        
cufflinks 3.224       High
cufflinks 1.759        
cufflinks 1.282        
cufflinks 1.366        
cufflinks 1.316        
cufflinks 1.2        
cufflinks 1.797        
cufflinks 1.389        
cufflinks 3.259       High
cufflinks 3.36       High
cufflinks 3.263       High
cufflinks 1.326        
cufflinks 0.482       Low
cufflinks 2.779        
cufflinks 2.134        
cufflinks 1.009       Low
cufflinks 1.863        

0 Strain