Gene : Sobic.006G147700 S. bicolor v3.1.1
Defline:  (1 of 2) 4.1.2.48 - Low-specificity L-threonine aldolase Genomic Order:  1551
Name:  ? Sobic.006G147700 Secondary Identifier:  ? PAC:37947021
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G147700 0.5kb upstream 0.5kb upstream 4950 true Chr06: 50929529-50934478 Sorghum bicolor
Sobic.006G147700 0.5kb upstream 0.5kb upstream 500 false Chr06: 50933979-50934478 Sorghum bicolor
Sobic.006G147700 0.5kb downstream 0.5kb downstream 4950 true Chr06: 50929029-50933978 Sorghum bicolor
Sobic.006G147700 0.5kb downstream 0.5kb downstream 500 false Chr06: 50929029-50929528 Sorghum bicolor
Sobic.006G147700 1.0kb upstream 1.0kb upstream 5450 true Chr06: 50929529-50934978 Sorghum bicolor
Sobic.006G147700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50933979-50934978 Sorghum bicolor
Sobic.006G147700 1.0kb downstream 1.0kb downstream 5450 true Chr06: 50928529-50933978 Sorghum bicolor
Sobic.006G147700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50928529-50929528 Sorghum bicolor
Sobic.006G147700 2.0kb upstream 2.0kb upstream 6450 true Chr06: 50929529-50935978 Sorghum bicolor
Sobic.006G147700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50933979-50935978 Sorghum bicolor
Sobic.006G147700 2.0kb downstream 2.0kb downstream 6450 true Chr06: 50927529-50933978 Sorghum bicolor
Sobic.006G147700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50927529-50929528 Sorghum bicolor
Sobic.006G147700 5.0kb upstream 5.0kb upstream 9450 true Chr06: 50929529-50938978 Sorghum bicolor
Sobic.006G147700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50933979-50938978 Sorghum bicolor
Sobic.006G147700 5.0kb downstream 5.0kb downstream 9450 true Chr06: 50924529-50933978 Sorghum bicolor
Sobic.006G147700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50924529-50929528 Sorghum bicolor
Sobic.006G147700 10.0kb upstream 10.0kb upstream 14450 true Chr06: 50929529-50943978 Sorghum bicolor
Sobic.006G147700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50933979-50943978 Sorghum bicolor
Sobic.006G147700 10.0kb downstream 10.0kb downstream 14450 true Chr06: 50919529-50933978 Sorghum bicolor
Sobic.006G147700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50919529-50929528 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185624 5267 Panicoideae View MSA
124570441 5269 Grass View MSA
122044905 5273 Angiosperm View MSA
121345445 5274 Embryophyte View MSA
123424169 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.675        
cufflinks 16.751     High High
cufflinks 12.061     High  
cufflinks 18.498     High High
cufflinks 7.656        
cufflinks 12.795        
cufflinks 3.451        
cufflinks 13.707     High  
cufflinks 10.458        
cufflinks 12.077     High  
cufflinks 0.45       Low
cufflinks 0.931       Low
cufflinks 6.33        
cufflinks 2.118        
cufflinks 16.112     High High
cufflinks 19.634     High High
cufflinks 3.037        
cufflinks 3.64        
cufflinks 7.862        
cufflinks 6.067        
cufflinks 11.863        
cufflinks 0.632       Low
cufflinks 0.539       Low
cufflinks 0.418       Low
cufflinks 9.497     High  
cufflinks 20.17     High High
cufflinks 1.169        
cufflinks 1.906        
cufflinks 5.194        
cufflinks 10.1        

0 Strain