Gene : Sobic.002G238100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11802//PTHR11802:SF59 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SUBFAMILY NOT NAMED Genomic Order:  2435
Name:  ? Sobic.002G238100 Secondary Identifier:  ? PAC:37950238
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G238100 0.5kb upstream 0.5kb upstream 4681 true Chr02: 62855830-62860510 Sorghum bicolor
Sobic.002G238100 0.5kb upstream 0.5kb upstream 500 false Chr02: 62855830-62856329 Sorghum bicolor
Sobic.002G238100 0.5kb downstream 0.5kb downstream 4681 true Chr02: 62856330-62861010 Sorghum bicolor
Sobic.002G238100 0.5kb downstream 0.5kb downstream 500 false Chr02: 62860511-62861010 Sorghum bicolor
Sobic.002G238100 1.0kb upstream 1.0kb upstream 5181 true Chr02: 62855330-62860510 Sorghum bicolor
Sobic.002G238100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 62855330-62856329 Sorghum bicolor
Sobic.002G238100 1.0kb downstream 1.0kb downstream 5181 true Chr02: 62856330-62861510 Sorghum bicolor
Sobic.002G238100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 62860511-62861510 Sorghum bicolor
Sobic.002G238100 2.0kb upstream 2.0kb upstream 6181 true Chr02: 62854330-62860510 Sorghum bicolor
Sobic.002G238100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 62854330-62856329 Sorghum bicolor
Sobic.002G238100 2.0kb downstream 2.0kb downstream 6181 true Chr02: 62856330-62862510 Sorghum bicolor
Sobic.002G238100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 62860511-62862510 Sorghum bicolor
Sobic.002G238100 5.0kb upstream 5.0kb upstream 9181 true Chr02: 62851330-62860510 Sorghum bicolor
Sobic.002G238100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 62851330-62856329 Sorghum bicolor
Sobic.002G238100 5.0kb downstream 5.0kb downstream 9181 true Chr02: 62856330-62865510 Sorghum bicolor
Sobic.002G238100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 62860511-62865510 Sorghum bicolor
Sobic.002G238100 10.0kb upstream 10.0kb upstream 14181 true Chr02: 62846330-62860510 Sorghum bicolor
Sobic.002G238100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 62846330-62856329 Sorghum bicolor
Sobic.002G238100 10.0kb downstream 10.0kb downstream 14181 true Chr02: 62856330-62870510 Sorghum bicolor
Sobic.002G238100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 62860511-62870510 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189406 5267 Panicoideae View MSA
124589215 5269 Grass View MSA
122048789 5273 Angiosperm View MSA
121311114 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.004     Low Low
cufflinks 0.005     Low Low
cufflinks 0.02     Low  
cufflinks 0.016     Low  
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.649        
cufflinks 27.474     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.972        
cufflinks 0.008     Low  
cufflinks 0.015     Low  
cufflinks 0.028     Low  
cufflinks 0.069     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.09     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 49.605     High High
cufflinks 31.287     High High
cufflinks 16.064     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 238.191     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain