Gene : Sobic.006G151001 S. bicolor v3.1.1
Defline:  (1 of 6) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  1585
Name:  ? Sobic.006G151001 Secondary Identifier:  ? PAC:37948409
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G151001 0.5kb upstream 0.5kb upstream 4822 true Chr06: 51187993-51192814 Sorghum bicolor
Sobic.006G151001 0.5kb upstream 0.5kb upstream 500 false Chr06: 51187993-51188492 Sorghum bicolor
Sobic.006G151001 0.5kb downstream 0.5kb downstream 4822 true Chr06: 51188493-51193314 Sorghum bicolor
Sobic.006G151001 0.5kb downstream 0.5kb downstream 500 false Chr06: 51192815-51193314 Sorghum bicolor
Sobic.006G151001 1.0kb upstream 1.0kb upstream 5322 true Chr06: 51187493-51192814 Sorghum bicolor
Sobic.006G151001 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51187493-51188492 Sorghum bicolor
Sobic.006G151001 1.0kb downstream 1.0kb downstream 5322 true Chr06: 51188493-51193814 Sorghum bicolor
Sobic.006G151001 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51192815-51193814 Sorghum bicolor
Sobic.006G151001 2.0kb upstream 2.0kb upstream 6322 true Chr06: 51186493-51192814 Sorghum bicolor
Sobic.006G151001 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51186493-51188492 Sorghum bicolor
Sobic.006G151001 2.0kb downstream 2.0kb downstream 6322 true Chr06: 51188493-51194814 Sorghum bicolor
Sobic.006G151001 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51192815-51194814 Sorghum bicolor
Sobic.006G151001 5.0kb upstream 5.0kb upstream 9322 true Chr06: 51183493-51192814 Sorghum bicolor
Sobic.006G151001 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51183493-51188492 Sorghum bicolor
Sobic.006G151001 5.0kb downstream 5.0kb downstream 9322 true Chr06: 51188493-51197814 Sorghum bicolor
Sobic.006G151001 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51192815-51197814 Sorghum bicolor
Sobic.006G151001 10.0kb upstream 10.0kb upstream 14322 true Chr06: 51178493-51192814 Sorghum bicolor
Sobic.006G151001 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51178493-51188492 Sorghum bicolor
Sobic.006G151001 10.0kb downstream 10.0kb downstream 14322 true Chr06: 51188493-51202814 Sorghum bicolor
Sobic.006G151001 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51192815-51202814 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191196 5267 Panicoideae View MSA
124588669 5269 Grass View MSA
122049386 5273 Angiosperm View MSA
121311379 5274 Embryophyte View MSA
123348684 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.421       High
cufflinks 0.714        
cufflinks 1.784       High
cufflinks 3.307       High
cufflinks 0.503        
cufflinks 0.543        
cufflinks 0.251        
cufflinks 0.159       Low
cufflinks 0.583        
cufflinks 0.93        
cufflinks 0.779        
cufflinks 0.363        
cufflinks 0.578        
cufflinks 0.316        
cufflinks 0.794        
cufflinks 2.086       High
cufflinks 0.297        
cufflinks 0.195       Low
cufflinks 0.506        
cufflinks 0.593        
cufflinks 0.296        
cufflinks 0.164       Low
cufflinks 0.313        
cufflinks 0.411        
cufflinks 0.34        
cufflinks 0.227        
cufflinks 1.511       High
cufflinks 2.5       High
cufflinks 0.213       Low
cufflinks 0.836        

0 Strain