Gene : Sobic.006G151100 S. bicolor v3.1.1
Defline:  (1 of 6) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  1586
Name:  ? Sobic.006G151100 Secondary Identifier:  ? PAC:37948907
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G151100 0.5kb upstream 0.5kb upstream 2144 true Chr06: 51194175-51196318 Sorghum bicolor
Sobic.006G151100 0.5kb upstream 0.5kb upstream 500 false Chr06: 51194175-51194674 Sorghum bicolor
Sobic.006G151100 0.5kb downstream 0.5kb downstream 2144 true Chr06: 51194675-51196818 Sorghum bicolor
Sobic.006G151100 0.5kb downstream 0.5kb downstream 500 false Chr06: 51196319-51196818 Sorghum bicolor
Sobic.006G151100 1.0kb upstream 1.0kb upstream 2644 true Chr06: 51193675-51196318 Sorghum bicolor
Sobic.006G151100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51193675-51194674 Sorghum bicolor
Sobic.006G151100 1.0kb downstream 1.0kb downstream 2644 true Chr06: 51194675-51197318 Sorghum bicolor
Sobic.006G151100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51196319-51197318 Sorghum bicolor
Sobic.006G151100 2.0kb upstream 2.0kb upstream 3644 true Chr06: 51192675-51196318 Sorghum bicolor
Sobic.006G151100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51192675-51194674 Sorghum bicolor
Sobic.006G151100 2.0kb downstream 2.0kb downstream 3644 true Chr06: 51194675-51198318 Sorghum bicolor
Sobic.006G151100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51196319-51198318 Sorghum bicolor
Sobic.006G151100 5.0kb upstream 5.0kb upstream 6644 true Chr06: 51189675-51196318 Sorghum bicolor
Sobic.006G151100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51189675-51194674 Sorghum bicolor
Sobic.006G151100 5.0kb downstream 5.0kb downstream 6644 true Chr06: 51194675-51201318 Sorghum bicolor
Sobic.006G151100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51196319-51201318 Sorghum bicolor
Sobic.006G151100 10.0kb upstream 10.0kb upstream 11644 true Chr06: 51184675-51196318 Sorghum bicolor
Sobic.006G151100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51184675-51194674 Sorghum bicolor
Sobic.006G151100 10.0kb downstream 10.0kb downstream 11644 true Chr06: 51194675-51206318 Sorghum bicolor
Sobic.006G151100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51196319-51206318 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188224 5267 Panicoideae View MSA
124569020 5269 Grass View MSA
122049164 5273 Angiosperm View MSA
121311275 5274 Embryophyte View MSA
123348590 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.514        
cufflinks 3.875       High
cufflinks 2.838        
cufflinks 3.214        
cufflinks 0.283        
cufflinks 8.535       High
cufflinks 3.777       High
cufflinks 3.484        
cufflinks 0.476        
cufflinks 0.261        
cufflinks 0.034     Low Low
cufflinks 0.063     Low Low
cufflinks 0.34        
cufflinks 0.023     Low Low
cufflinks 1.23        
cufflinks 6.379       High
cufflinks 3.334        
cufflinks 5.214       High
cufflinks 2.757        
cufflinks 3.803       High
cufflinks 0.37        
cufflinks 0.055     Low Low
cufflinks 0.063     Low Low
cufflinks 0.088     Low Low
cufflinks 4.503       High
cufflinks 3.748       High
cufflinks 0.258        
cufflinks 0.464        
cufflinks 5.695       High
cufflinks 1.056        

0 Strain