Gene : Sobic.006G157300 S. bicolor v3.1.1
Defline:  similar to OSIGBa0155K17.11 protein Genomic Order:  1642
Name:  ? Sobic.006G157300 Secondary Identifier:  ? PAC:37946971
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G157300 0.5kb upstream 0.5kb upstream 3860 true Chr06: 51621228-51625087 Sorghum bicolor
Sobic.006G157300 0.5kb upstream 0.5kb upstream 500 false Chr06: 51624588-51625087 Sorghum bicolor
Sobic.006G157300 0.5kb downstream 0.5kb downstream 3860 true Chr06: 51620728-51624587 Sorghum bicolor
Sobic.006G157300 0.5kb downstream 0.5kb downstream 500 false Chr06: 51620728-51621227 Sorghum bicolor
Sobic.006G157300 1.0kb upstream 1.0kb upstream 4360 true Chr06: 51621228-51625587 Sorghum bicolor
Sobic.006G157300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51624588-51625587 Sorghum bicolor
Sobic.006G157300 1.0kb downstream 1.0kb downstream 4360 true Chr06: 51620228-51624587 Sorghum bicolor
Sobic.006G157300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51620228-51621227 Sorghum bicolor
Sobic.006G157300 2.0kb upstream 2.0kb upstream 5360 true Chr06: 51621228-51626587 Sorghum bicolor
Sobic.006G157300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51624588-51626587 Sorghum bicolor
Sobic.006G157300 2.0kb downstream 2.0kb downstream 5360 true Chr06: 51619228-51624587 Sorghum bicolor
Sobic.006G157300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51619228-51621227 Sorghum bicolor
Sobic.006G157300 5.0kb upstream 5.0kb upstream 8360 true Chr06: 51621228-51629587 Sorghum bicolor
Sobic.006G157300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51624588-51629587 Sorghum bicolor
Sobic.006G157300 5.0kb downstream 5.0kb downstream 8360 true Chr06: 51616228-51624587 Sorghum bicolor
Sobic.006G157300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51616228-51621227 Sorghum bicolor
Sobic.006G157300 10.0kb upstream 10.0kb upstream 13360 true Chr06: 51621228-51634587 Sorghum bicolor
Sobic.006G157300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51624588-51634587 Sorghum bicolor
Sobic.006G157300 10.0kb downstream 10.0kb downstream 13360 true Chr06: 51611228-51624587 Sorghum bicolor
Sobic.006G157300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51611228-51621227 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041445 5273 Angiosperm View MSA
122189340 5267 Panicoideae View MSA
124580447 5269 Grass View MSA
121345891 5274 Embryophyte View MSA
123428048 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.999       High
cufflinks 1.234       Low
cufflinks 1.96        
cufflinks 3.5        
cufflinks 3.368        
cufflinks 3.666        
cufflinks 2.462        
cufflinks 0.948       Low
cufflinks 3.609        
cufflinks 3.808        
cufflinks 3.04        
cufflinks 2.901        
cufflinks 3.133        
cufflinks 3.148        
cufflinks 3.182        
cufflinks 2.312        
cufflinks 2.66        
cufflinks 2.72        
cufflinks 1.341       Low
cufflinks 3.623        
cufflinks 4.103        
cufflinks 3.734        
cufflinks 3.325        
cufflinks 2.97        
cufflinks 2.481        
cufflinks 1.084       Low
cufflinks 2.427        
cufflinks 19.165     High High
cufflinks 1.825        
cufflinks 3.738        

0 Strain