Gene : Sobic.002G218100 S. bicolor v3.1.1
Defline:  (1 of 1) 2.5.1.79 - Thermospermine synthase Genomic Order:  2229
Name:  ? Sobic.002G218100 Secondary Identifier:  ? PAC:37953406
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G218100 0.5kb upstream 0.5kb upstream 4203 true Chr02: 61012736-61016938 Sorghum bicolor
Sobic.002G218100 0.5kb upstream 0.5kb upstream 500 false Chr02: 61012736-61013235 Sorghum bicolor
Sobic.002G218100 0.5kb downstream 0.5kb downstream 4203 true Chr02: 61013236-61017438 Sorghum bicolor
Sobic.002G218100 0.5kb downstream 0.5kb downstream 500 false Chr02: 61016939-61017438 Sorghum bicolor
Sobic.002G218100 1.0kb upstream 1.0kb upstream 4703 true Chr02: 61012236-61016938 Sorghum bicolor
Sobic.002G218100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 61012236-61013235 Sorghum bicolor
Sobic.002G218100 1.0kb downstream 1.0kb downstream 4703 true Chr02: 61013236-61017938 Sorghum bicolor
Sobic.002G218100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 61016939-61017938 Sorghum bicolor
Sobic.002G218100 2.0kb upstream 2.0kb upstream 5703 true Chr02: 61011236-61016938 Sorghum bicolor
Sobic.002G218100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 61011236-61013235 Sorghum bicolor
Sobic.002G218100 2.0kb downstream 2.0kb downstream 5703 true Chr02: 61013236-61018938 Sorghum bicolor
Sobic.002G218100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 61016939-61018938 Sorghum bicolor
Sobic.002G218100 5.0kb upstream 5.0kb upstream 8703 true Chr02: 61008236-61016938 Sorghum bicolor
Sobic.002G218100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 61008236-61013235 Sorghum bicolor
Sobic.002G218100 5.0kb downstream 5.0kb downstream 8703 true Chr02: 61013236-61021938 Sorghum bicolor
Sobic.002G218100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 61016939-61021938 Sorghum bicolor
Sobic.002G218100 10.0kb upstream 10.0kb upstream 13703 true Chr02: 61003236-61016938 Sorghum bicolor
Sobic.002G218100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 61003236-61013235 Sorghum bicolor
Sobic.002G218100 10.0kb downstream 10.0kb downstream 13703 true Chr02: 61013236-61026938 Sorghum bicolor
Sobic.002G218100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 61016939-61026938 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187008 5267 Panicoideae View MSA
124590287 5269 Grass View MSA
122050339 5273 Angiosperm View MSA
121346949 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032     Low Low
cufflinks 2.31       High
cufflinks 0.216        
cufflinks 0.093        
cufflinks 0.011     Low Low
cufflinks 0.292        
cufflinks 0.583        
cufflinks 7.804       High
cufflinks 0.714        
cufflinks 0.337        
cufflinks 0.957        
cufflinks 1.226        
cufflinks 0.099        
cufflinks 0.322        
cufflinks 0.283        
cufflinks 1.337        
cufflinks 0.495        
cufflinks 0.441        
cufflinks 1.812       High
cufflinks 0.377        
cufflinks 0.007     Low Low
cufflinks 0.533        
cufflinks 0.308        
cufflinks 0.394        
cufflinks 2.683       High
cufflinks 6.649     High High
cufflinks 0.884        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.282        
cufflinks 0.06     Low Low

0 Strain