Gene : Sobic.006G157900 S. bicolor v3.1.1
Defline:  (1 of 24) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  1649
Name:  ? Sobic.006G157900 Secondary Identifier:  ? PAC:37947137
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G157900 0.5kb upstream 0.5kb upstream 3093 true Chr06: 51658360-51661452 Sorghum bicolor
Sobic.006G157900 0.5kb upstream 0.5kb upstream 500 false Chr06: 51658360-51658859 Sorghum bicolor
Sobic.006G157900 0.5kb downstream 0.5kb downstream 3093 true Chr06: 51658860-51661952 Sorghum bicolor
Sobic.006G157900 0.5kb downstream 0.5kb downstream 500 false Chr06: 51661453-51661952 Sorghum bicolor
Sobic.006G157900 1.0kb upstream 1.0kb upstream 3593 true Chr06: 51657860-51661452 Sorghum bicolor
Sobic.006G157900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51657860-51658859 Sorghum bicolor
Sobic.006G157900 1.0kb downstream 1.0kb downstream 3593 true Chr06: 51658860-51662452 Sorghum bicolor
Sobic.006G157900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51661453-51662452 Sorghum bicolor
Sobic.006G157900 2.0kb upstream 2.0kb upstream 4593 true Chr06: 51656860-51661452 Sorghum bicolor
Sobic.006G157900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51656860-51658859 Sorghum bicolor
Sobic.006G157900 2.0kb downstream 2.0kb downstream 4593 true Chr06: 51658860-51663452 Sorghum bicolor
Sobic.006G157900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51661453-51663452 Sorghum bicolor
Sobic.006G157900 5.0kb upstream 5.0kb upstream 7593 true Chr06: 51653860-51661452 Sorghum bicolor
Sobic.006G157900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51653860-51658859 Sorghum bicolor
Sobic.006G157900 5.0kb downstream 5.0kb downstream 7593 true Chr06: 51658860-51666452 Sorghum bicolor
Sobic.006G157900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51661453-51666452 Sorghum bicolor
Sobic.006G157900 10.0kb upstream 10.0kb upstream 12593 true Chr06: 51648860-51661452 Sorghum bicolor
Sobic.006G157900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51648860-51658859 Sorghum bicolor
Sobic.006G157900 10.0kb downstream 10.0kb downstream 12593 true Chr06: 51658860-51671452 Sorghum bicolor
Sobic.006G157900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51661453-51671452 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180801 5267 Panicoideae View MSA
124586579 5269 Grass View MSA
122043310 5273 Angiosperm View MSA
121351694 5274 Embryophyte View MSA
123426112 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.512        
cufflinks 0.659        
cufflinks 0.678        
cufflinks 0.223       Low
cufflinks 0.418        
cufflinks 1.519        
cufflinks 1.732        
cufflinks 1.518        
cufflinks 0.141       Low
cufflinks 0.093       Low
cufflinks 10.017       High
cufflinks 7.216       High
cufflinks 0.251       Low
cufflinks 8.461       High
cufflinks 1.74        
cufflinks 0.754        
cufflinks 1.861        
cufflinks 1.4        
cufflinks 0.387        
cufflinks 2.275        
cufflinks 0.311       Low
cufflinks 7.383       High
cufflinks 5.936       High
cufflinks 7.365       High
cufflinks 0.36       Low
cufflinks 0.912        
cufflinks 4.394        
cufflinks 0.163       Low
cufflinks 1.007        
cufflinks 1.879        

0 Strain