Gene : Sobic.002G220600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR30540//PTHR30540:SF5 - OSMOTIC STRESS POTASSIUM TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  2257
Name:  ? Sobic.002G220600 Secondary Identifier:  ? PAC:37950431
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G220600 0.5kb upstream 0.5kb upstream 7211 true Chr02: 61217706-61224916 Sorghum bicolor
Sobic.002G220600 0.5kb upstream 0.5kb upstream 500 false Chr02: 61217706-61218205 Sorghum bicolor
Sobic.002G220600 0.5kb downstream 0.5kb downstream 7211 true Chr02: 61218206-61225416 Sorghum bicolor
Sobic.002G220600 0.5kb downstream 0.5kb downstream 500 false Chr02: 61224917-61225416 Sorghum bicolor
Sobic.002G220600 1.0kb upstream 1.0kb upstream 7711 true Chr02: 61217206-61224916 Sorghum bicolor
Sobic.002G220600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 61217206-61218205 Sorghum bicolor
Sobic.002G220600 1.0kb downstream 1.0kb downstream 7711 true Chr02: 61218206-61225916 Sorghum bicolor
Sobic.002G220600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 61224917-61225916 Sorghum bicolor
Sobic.002G220600 2.0kb upstream 2.0kb upstream 8711 true Chr02: 61216206-61224916 Sorghum bicolor
Sobic.002G220600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 61216206-61218205 Sorghum bicolor
Sobic.002G220600 2.0kb downstream 2.0kb downstream 8711 true Chr02: 61218206-61226916 Sorghum bicolor
Sobic.002G220600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 61224917-61226916 Sorghum bicolor
Sobic.002G220600 5.0kb upstream 5.0kb upstream 11711 true Chr02: 61213206-61224916 Sorghum bicolor
Sobic.002G220600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 61213206-61218205 Sorghum bicolor
Sobic.002G220600 5.0kb downstream 5.0kb downstream 11711 true Chr02: 61218206-61229916 Sorghum bicolor
Sobic.002G220600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 61224917-61229916 Sorghum bicolor
Sobic.002G220600 10.0kb upstream 10.0kb upstream 16711 true Chr02: 61208206-61224916 Sorghum bicolor
Sobic.002G220600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 61208206-61218205 Sorghum bicolor
Sobic.002G220600 10.0kb downstream 10.0kb downstream 16711 true Chr02: 61218206-61234916 Sorghum bicolor
Sobic.002G220600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 61224917-61234916 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179028 5267 Panicoideae View MSA
124581469 5269 Grass View MSA
122049988 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121348736 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.365       High
cufflinks 0.151        
cufflinks 0.878        
cufflinks 1.824       High
cufflinks 0.249        
cufflinks 0.809        
cufflinks 0.197        
cufflinks 0.061     Low  
cufflinks 1.662       High
cufflinks 1.021        
cufflinks 0.026     Low Low
cufflinks 0.236        
cufflinks 0.575        
cufflinks 0.11        
cufflinks 1.829       High
cufflinks 0.542        
cufflinks 0.201        
cufflinks 0.17        
cufflinks 0.642        
cufflinks 0.416        
cufflinks 0.066     Low  
cufflinks 0.107     Low  
cufflinks 0.063     Low  
cufflinks 0.06     Low  
cufflinks 1.09       High
cufflinks 0.155        
cufflinks 0.287        
cufflinks 3.137       High
cufflinks 0.138        
cufflinks 3.044       High

0 Strain