Gene : Sobic.006G158100 S. bicolor v3.1.1
Defline:  (1 of 1) 1.3.1.91 - tRNA-dihydrouridine(20) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 2 Genomic Order:  1651
Name:  ? Sobic.006G158100 Secondary Identifier:  ? PAC:37945685
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G158100 0.5kb upstream 0.5kb upstream 5493 true Chr06: 51664611-51670103 Sorghum bicolor
Sobic.006G158100 0.5kb upstream 0.5kb upstream 500 false Chr06: 51664611-51665110 Sorghum bicolor
Sobic.006G158100 0.5kb downstream 0.5kb downstream 5493 true Chr06: 51665111-51670603 Sorghum bicolor
Sobic.006G158100 0.5kb downstream 0.5kb downstream 500 false Chr06: 51670104-51670603 Sorghum bicolor
Sobic.006G158100 1.0kb upstream 1.0kb upstream 5993 true Chr06: 51664111-51670103 Sorghum bicolor
Sobic.006G158100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51664111-51665110 Sorghum bicolor
Sobic.006G158100 1.0kb downstream 1.0kb downstream 5993 true Chr06: 51665111-51671103 Sorghum bicolor
Sobic.006G158100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51670104-51671103 Sorghum bicolor
Sobic.006G158100 2.0kb upstream 2.0kb upstream 6993 true Chr06: 51663111-51670103 Sorghum bicolor
Sobic.006G158100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51663111-51665110 Sorghum bicolor
Sobic.006G158100 2.0kb downstream 2.0kb downstream 6993 true Chr06: 51665111-51672103 Sorghum bicolor
Sobic.006G158100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51670104-51672103 Sorghum bicolor
Sobic.006G158100 5.0kb upstream 5.0kb upstream 9993 true Chr06: 51660111-51670103 Sorghum bicolor
Sobic.006G158100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51660111-51665110 Sorghum bicolor
Sobic.006G158100 5.0kb downstream 5.0kb downstream 9993 true Chr06: 51665111-51675103 Sorghum bicolor
Sobic.006G158100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51670104-51675103 Sorghum bicolor
Sobic.006G158100 10.0kb upstream 10.0kb upstream 14993 true Chr06: 51655111-51670103 Sorghum bicolor
Sobic.006G158100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51655111-51665110 Sorghum bicolor
Sobic.006G158100 10.0kb downstream 10.0kb downstream 14993 true Chr06: 51665111-51680103 Sorghum bicolor
Sobic.006G158100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51670104-51680103 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189786 5267 Panicoideae View MSA
124571703 5269 Grass View MSA
122048922 5273 Angiosperm View MSA
121348222 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.206       Low
cufflinks 21.37     High High
cufflinks 44.181     High High
cufflinks 31.105     High High
cufflinks 6.308        
cufflinks 13.364        
cufflinks 9.646        
cufflinks 14.154     High  
cufflinks 5.286        
cufflinks 5.894        
cufflinks 4.776        
cufflinks 3.746       Low
cufflinks 10.919        
cufflinks 2.841       Low
cufflinks 13.044     High  
cufflinks 24.845     High High
cufflinks 9.089        
cufflinks 9.671        
cufflinks 16.609     High High
cufflinks 10.555        
cufflinks 4.289        
cufflinks 4.228        
cufflinks 4.69        
cufflinks 4.234        
cufflinks 21.136     High High
cufflinks 19.77     High High
cufflinks 6.545        
cufflinks 2.061       Low
cufflinks 6.45        
cufflinks 9.872        

0 Strain