Gene : Sobic.002G353500 S. bicolor v3.1.1
Defline:  (1 of 1) K11338 - RuvB-like protein 2 [EC:3.6.4.12] (RUVBL2, RVB2, INO80J) Genomic Order:  3618
Name:  ? Sobic.002G353500 Secondary Identifier:  ? PAC:37952048
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G353500 0.5kb upstream 0.5kb upstream 3618 true Chr02: 71665731-71669348 Sorghum bicolor
Sobic.002G353500 0.5kb upstream 0.5kb upstream 500 false Chr02: 71665731-71666230 Sorghum bicolor
Sobic.002G353500 0.5kb downstream 0.5kb downstream 3618 true Chr02: 71666231-71669848 Sorghum bicolor
Sobic.002G353500 0.5kb downstream 0.5kb downstream 500 false Chr02: 71669349-71669848 Sorghum bicolor
Sobic.002G353500 1.0kb upstream 1.0kb upstream 4118 true Chr02: 71665231-71669348 Sorghum bicolor
Sobic.002G353500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 71665231-71666230 Sorghum bicolor
Sobic.002G353500 1.0kb downstream 1.0kb downstream 4118 true Chr02: 71666231-71670348 Sorghum bicolor
Sobic.002G353500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 71669349-71670348 Sorghum bicolor
Sobic.002G353500 2.0kb upstream 2.0kb upstream 5118 true Chr02: 71664231-71669348 Sorghum bicolor
Sobic.002G353500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 71664231-71666230 Sorghum bicolor
Sobic.002G353500 2.0kb downstream 2.0kb downstream 5118 true Chr02: 71666231-71671348 Sorghum bicolor
Sobic.002G353500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 71669349-71671348 Sorghum bicolor
Sobic.002G353500 5.0kb upstream 5.0kb upstream 8118 true Chr02: 71661231-71669348 Sorghum bicolor
Sobic.002G353500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 71661231-71666230 Sorghum bicolor
Sobic.002G353500 5.0kb downstream 5.0kb downstream 8118 true Chr02: 71666231-71674348 Sorghum bicolor
Sobic.002G353500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 71669349-71674348 Sorghum bicolor
Sobic.002G353500 10.0kb upstream 10.0kb upstream 13118 true Chr02: 71656231-71669348 Sorghum bicolor
Sobic.002G353500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 71656231-71666230 Sorghum bicolor
Sobic.002G353500 10.0kb downstream 10.0kb downstream 13118 true Chr02: 71666231-71679348 Sorghum bicolor
Sobic.002G353500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 71669349-71679348 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177089 5267 Panicoideae View MSA
124584257 5269 Grass View MSA
122045825 5273 Angiosperm View MSA
121346627 5274 Embryophyte View MSA
123423891 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.365     High High
cufflinks 0.476       Low
cufflinks 1.575       Low
cufflinks 5.661        
cufflinks 11.267        
cufflinks 4.532        
cufflinks 6.577        
cufflinks 0.643       Low
cufflinks 10.575        
cufflinks 10.465        
cufflinks 7.054        
cufflinks 7.855        
cufflinks 5.007        
cufflinks 7.998        
cufflinks 6.71        
cufflinks 1.923       Low
cufflinks 6.741        
cufflinks 7.053        
cufflinks 1.682       Low
cufflinks 6.953        
cufflinks 26.199     High High
cufflinks 9.064        
cufflinks 9.291        
cufflinks 10.143        
cufflinks 1.174       Low
cufflinks 0.342       Low
cufflinks 5.439        
cufflinks 57.525     High High
cufflinks 2.625        
cufflinks 11.527        

0 Strain