Gene : Sobic.006G097500 S. bicolor v3.1.1
Defline:  (1 of 1) K09838 - zeaxanthin epoxidase (ZEP, ABA1) Genomic Order:  1011
Name:  ? Sobic.006G097500 Secondary Identifier:  ? PAC:37948775
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G097500 0.5kb upstream 0.5kb upstream 7372 true Chr06: 46715030-46722401 Sorghum bicolor
Sobic.006G097500 0.5kb upstream 0.5kb upstream 500 false Chr06: 46715030-46715529 Sorghum bicolor
Sobic.006G097500 0.5kb downstream 0.5kb downstream 7372 true Chr06: 46715530-46722901 Sorghum bicolor
Sobic.006G097500 0.5kb downstream 0.5kb downstream 500 false Chr06: 46722402-46722901 Sorghum bicolor
Sobic.006G097500 1.0kb upstream 1.0kb upstream 7872 true Chr06: 46714530-46722401 Sorghum bicolor
Sobic.006G097500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46714530-46715529 Sorghum bicolor
Sobic.006G097500 1.0kb downstream 1.0kb downstream 7872 true Chr06: 46715530-46723401 Sorghum bicolor
Sobic.006G097500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46722402-46723401 Sorghum bicolor
Sobic.006G097500 2.0kb upstream 2.0kb upstream 8872 true Chr06: 46713530-46722401 Sorghum bicolor
Sobic.006G097500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46713530-46715529 Sorghum bicolor
Sobic.006G097500 2.0kb downstream 2.0kb downstream 8872 true Chr06: 46715530-46724401 Sorghum bicolor
Sobic.006G097500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46722402-46724401 Sorghum bicolor
Sobic.006G097500 5.0kb upstream 5.0kb upstream 11872 true Chr06: 46710530-46722401 Sorghum bicolor
Sobic.006G097500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46710530-46715529 Sorghum bicolor
Sobic.006G097500 5.0kb downstream 5.0kb downstream 11872 true Chr06: 46715530-46727401 Sorghum bicolor
Sobic.006G097500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46722402-46727401 Sorghum bicolor
Sobic.006G097500 10.0kb upstream 10.0kb upstream 16872 true Chr06: 46705530-46722401 Sorghum bicolor
Sobic.006G097500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46705530-46715529 Sorghum bicolor
Sobic.006G097500 10.0kb downstream 10.0kb downstream 16872 true Chr06: 46715530-46732401 Sorghum bicolor
Sobic.006G097500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46722402-46732401 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181979 5267 Panicoideae View MSA
124576296 5269 Grass View MSA
122051676 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349162 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.445        
cufflinks 69.338     High High
cufflinks 17.488     High  
cufflinks 37.825     High High
cufflinks 8.519        
cufflinks 8.035        
cufflinks 27.558     High  
cufflinks 79.131     High High
cufflinks 5.951        
cufflinks 5.659        
cufflinks 3.431        
cufflinks 2.184       Low
cufflinks 7.879        
cufflinks 3.02       Low
cufflinks 6.475        
cufflinks 39.841     High High
cufflinks 39.87     High High
cufflinks 14.855     High  
cufflinks 37.149     High High
cufflinks 30.417     High  
cufflinks 3.016       Low
cufflinks 2.583       Low
cufflinks 1.666       Low
cufflinks 1.929       Low
cufflinks 44.761     High High
cufflinks 80.833     High High
cufflinks 7.217        
cufflinks 24.798     High  
cufflinks 41.309     High High
cufflinks 3.923        

0 Strain