Gene : Sobic.002G343400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33510:SF6 - PROTEIN TIC 20-I, CHLOROPLASTIC Genomic Order:  3512
Name:  ? Sobic.002G343400 Secondary Identifier:  ? PAC:37949794
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G343400 0.5kb upstream 0.5kb upstream 4257 true Chr02: 70965277-70969533 Sorghum bicolor
Sobic.002G343400 0.5kb upstream 0.5kb upstream 500 false Chr02: 70969034-70969533 Sorghum bicolor
Sobic.002G343400 0.5kb downstream 0.5kb downstream 4257 true Chr02: 70964777-70969033 Sorghum bicolor
Sobic.002G343400 0.5kb downstream 0.5kb downstream 500 false Chr02: 70964777-70965276 Sorghum bicolor
Sobic.002G343400 1.0kb upstream 1.0kb upstream 4757 true Chr02: 70965277-70970033 Sorghum bicolor
Sobic.002G343400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 70969034-70970033 Sorghum bicolor
Sobic.002G343400 1.0kb downstream 1.0kb downstream 4757 true Chr02: 70964277-70969033 Sorghum bicolor
Sobic.002G343400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 70964277-70965276 Sorghum bicolor
Sobic.002G343400 2.0kb upstream 2.0kb upstream 5757 true Chr02: 70965277-70971033 Sorghum bicolor
Sobic.002G343400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 70969034-70971033 Sorghum bicolor
Sobic.002G343400 2.0kb downstream 2.0kb downstream 5757 true Chr02: 70963277-70969033 Sorghum bicolor
Sobic.002G343400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 70963277-70965276 Sorghum bicolor
Sobic.002G343400 5.0kb upstream 5.0kb upstream 8757 true Chr02: 70965277-70974033 Sorghum bicolor
Sobic.002G343400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 70969034-70974033 Sorghum bicolor
Sobic.002G343400 5.0kb downstream 5.0kb downstream 8757 true Chr02: 70960277-70969033 Sorghum bicolor
Sobic.002G343400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 70960277-70965276 Sorghum bicolor
Sobic.002G343400 10.0kb upstream 10.0kb upstream 13757 true Chr02: 70965277-70979033 Sorghum bicolor
Sobic.002G343400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 70969034-70979033 Sorghum bicolor
Sobic.002G343400 10.0kb downstream 10.0kb downstream 13757 true Chr02: 70955277-70969033 Sorghum bicolor
Sobic.002G343400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 70955277-70965276 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198426 5267 Panicoideae View MSA
124589976 5269 Grass View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.091     High High
cufflinks 1.72       Low
cufflinks 7.718        
cufflinks 10.25       High
cufflinks 4.548        
cufflinks 8.827       High
cufflinks 7.746        
cufflinks 5.277        
cufflinks 6.296        
cufflinks 5.267        
cufflinks 3.03       Low
cufflinks 4.382        
cufflinks 3.95        
cufflinks 4.072        
cufflinks 4.927        
cufflinks 6.533        
cufflinks 8.432        
cufflinks 10.1       High
cufflinks 5.137        
cufflinks 9.784       High
cufflinks 3.034       Low
cufflinks 4.088        
cufflinks 4.184        
cufflinks 4.44        
cufflinks 3.699        
cufflinks 1.483       Low
cufflinks 4.063        
cufflinks 11.342     High High
cufflinks 14.779     High High
cufflinks 5.515        

0 Strain