Gene : Sobic.002G342000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  3498
Name:  ? Sobic.002G342000 Secondary Identifier:  ? PAC:37954328
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G342000 0.5kb upstream 0.5kb upstream 4676 true Chr02: 70857331-70862006 Sorghum bicolor
Sobic.002G342000 0.5kb upstream 0.5kb upstream 500 false Chr02: 70861507-70862006 Sorghum bicolor
Sobic.002G342000 0.5kb downstream 0.5kb downstream 4676 true Chr02: 70856831-70861506 Sorghum bicolor
Sobic.002G342000 0.5kb downstream 0.5kb downstream 500 false Chr02: 70856831-70857330 Sorghum bicolor
Sobic.002G342000 1.0kb upstream 1.0kb upstream 5176 true Chr02: 70857331-70862506 Sorghum bicolor
Sobic.002G342000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 70861507-70862506 Sorghum bicolor
Sobic.002G342000 1.0kb downstream 1.0kb downstream 5176 true Chr02: 70856331-70861506 Sorghum bicolor
Sobic.002G342000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 70856331-70857330 Sorghum bicolor
Sobic.002G342000 2.0kb upstream 2.0kb upstream 6176 true Chr02: 70857331-70863506 Sorghum bicolor
Sobic.002G342000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 70861507-70863506 Sorghum bicolor
Sobic.002G342000 2.0kb downstream 2.0kb downstream 6176 true Chr02: 70855331-70861506 Sorghum bicolor
Sobic.002G342000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 70855331-70857330 Sorghum bicolor
Sobic.002G342000 5.0kb upstream 5.0kb upstream 9176 true Chr02: 70857331-70866506 Sorghum bicolor
Sobic.002G342000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 70861507-70866506 Sorghum bicolor
Sobic.002G342000 5.0kb downstream 5.0kb downstream 9176 true Chr02: 70852331-70861506 Sorghum bicolor
Sobic.002G342000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 70852331-70857330 Sorghum bicolor
Sobic.002G342000 10.0kb upstream 10.0kb upstream 14176 true Chr02: 70857331-70871506 Sorghum bicolor
Sobic.002G342000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 70861507-70871506 Sorghum bicolor
Sobic.002G342000 10.0kb downstream 10.0kb downstream 14176 true Chr02: 70847331-70861506 Sorghum bicolor
Sobic.002G342000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 70847331-70857330 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
122175814 5267 Panicoideae View MSA
124571275 5269 Grass View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.562     High High
cufflinks 3.167       Low
cufflinks 7.807        
cufflinks 8.171        
cufflinks 8.747        
cufflinks 10.938       High
cufflinks 7.295        
cufflinks 2.043       Low
cufflinks 7.34        
cufflinks 7.117        
cufflinks 9.045        
cufflinks 10.796        
cufflinks 8.825        
cufflinks 9.978        
cufflinks 8.87        
cufflinks 5.46        
cufflinks 6.826        
cufflinks 7.269        
cufflinks 4.116       Low
cufflinks 8.674        
cufflinks 6.572        
cufflinks 7.11        
cufflinks 8.692        
cufflinks 9.085        
cufflinks 7.401        
cufflinks 2.278       Low
cufflinks 7.136        
cufflinks 1.929       Low
cufflinks 4.703        
cufflinks 8.986        

0 Strain