Gene : Sobic.006G102100 S. bicolor v3.1.1
Defline:  (1 of 2) K12827 - splicing factor 3A subunit 3 (SF3A3, SAP61, PRP9) Genomic Order:  1058
Name:  ? Sobic.006G102100 Secondary Identifier:  ? PAC:37945839
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G102100 0.5kb upstream 0.5kb upstream 10101 true Chr06: 47244718-47254818 Sorghum bicolor
Sobic.006G102100 0.5kb upstream 0.5kb upstream 500 false Chr06: 47244718-47245217 Sorghum bicolor
Sobic.006G102100 0.5kb downstream 0.5kb downstream 10101 true Chr06: 47245218-47255318 Sorghum bicolor
Sobic.006G102100 0.5kb downstream 0.5kb downstream 500 false Chr06: 47254819-47255318 Sorghum bicolor
Sobic.006G102100 1.0kb upstream 1.0kb upstream 10601 true Chr06: 47244218-47254818 Sorghum bicolor
Sobic.006G102100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47244218-47245217 Sorghum bicolor
Sobic.006G102100 1.0kb downstream 1.0kb downstream 10601 true Chr06: 47245218-47255818 Sorghum bicolor
Sobic.006G102100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47254819-47255818 Sorghum bicolor
Sobic.006G102100 2.0kb upstream 2.0kb upstream 11601 true Chr06: 47243218-47254818 Sorghum bicolor
Sobic.006G102100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47243218-47245217 Sorghum bicolor
Sobic.006G102100 2.0kb downstream 2.0kb downstream 11601 true Chr06: 47245218-47256818 Sorghum bicolor
Sobic.006G102100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47254819-47256818 Sorghum bicolor
Sobic.006G102100 5.0kb upstream 5.0kb upstream 14601 true Chr06: 47240218-47254818 Sorghum bicolor
Sobic.006G102100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47240218-47245217 Sorghum bicolor
Sobic.006G102100 5.0kb downstream 5.0kb downstream 14601 true Chr06: 47245218-47259818 Sorghum bicolor
Sobic.006G102100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47254819-47259818 Sorghum bicolor
Sobic.006G102100 10.0kb upstream 10.0kb upstream 19601 true Chr06: 47235218-47254818 Sorghum bicolor
Sobic.006G102100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47235218-47245217 Sorghum bicolor
Sobic.006G102100 10.0kb downstream 10.0kb downstream 19601 true Chr06: 47245218-47264818 Sorghum bicolor
Sobic.006G102100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47254819-47264818 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179392 5267 Panicoideae View MSA
124572098 5269 Grass View MSA
122042756 5273 Angiosperm View MSA
123429134 5275 Viridiplantae View MSA
121345552 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.833       High
cufflinks 0.9       Low
cufflinks 2.119        
cufflinks 4.146        
cufflinks 5.521        
cufflinks 4.627        
cufflinks 3.231        
cufflinks 1.171       Low
cufflinks 6.42       High
cufflinks 5.88       High
cufflinks 3.583        
cufflinks 4.447        
cufflinks 4.346        
cufflinks 3.584        
cufflinks 2.971        
cufflinks 1.566       Low
cufflinks 3.375        
cufflinks 3.508        
cufflinks 2.04        
cufflinks 4.107        
cufflinks 6.77       High
cufflinks 4.052        
cufflinks 3.943        
cufflinks 3.847        
cufflinks 1.583       Low
cufflinks 0.827       Low
cufflinks 3.696        
cufflinks 7.843       High
cufflinks 1.897       Low
cufflinks 3.554        

0 Strain