Gene : Sobic.006G102000 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  1057
Name:  ? Sobic.006G102000 Secondary Identifier:  ? PAC:37948027
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G102000 0.5kb upstream 0.5kb upstream 3958 true Chr06: 47235305-47239262 Sorghum bicolor
Sobic.006G102000 0.5kb upstream 0.5kb upstream 500 false Chr06: 47238763-47239262 Sorghum bicolor
Sobic.006G102000 0.5kb downstream 0.5kb downstream 3958 true Chr06: 47234805-47238762 Sorghum bicolor
Sobic.006G102000 0.5kb downstream 0.5kb downstream 500 false Chr06: 47234805-47235304 Sorghum bicolor
Sobic.006G102000 1.0kb upstream 1.0kb upstream 4458 true Chr06: 47235305-47239762 Sorghum bicolor
Sobic.006G102000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47238763-47239762 Sorghum bicolor
Sobic.006G102000 1.0kb downstream 1.0kb downstream 4458 true Chr06: 47234305-47238762 Sorghum bicolor
Sobic.006G102000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47234305-47235304 Sorghum bicolor
Sobic.006G102000 2.0kb upstream 2.0kb upstream 5458 true Chr06: 47235305-47240762 Sorghum bicolor
Sobic.006G102000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47238763-47240762 Sorghum bicolor
Sobic.006G102000 2.0kb downstream 2.0kb downstream 5458 true Chr06: 47233305-47238762 Sorghum bicolor
Sobic.006G102000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47233305-47235304 Sorghum bicolor
Sobic.006G102000 5.0kb upstream 5.0kb upstream 8458 true Chr06: 47235305-47243762 Sorghum bicolor
Sobic.006G102000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47238763-47243762 Sorghum bicolor
Sobic.006G102000 5.0kb downstream 5.0kb downstream 8458 true Chr06: 47230305-47238762 Sorghum bicolor
Sobic.006G102000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47230305-47235304 Sorghum bicolor
Sobic.006G102000 10.0kb upstream 10.0kb upstream 13458 true Chr06: 47235305-47248762 Sorghum bicolor
Sobic.006G102000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47238763-47248762 Sorghum bicolor
Sobic.006G102000 10.0kb downstream 10.0kb downstream 13458 true Chr06: 47225305-47238762 Sorghum bicolor
Sobic.006G102000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47225305-47235304 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184394 5267 Panicoideae View MSA
124587187 5269 Grass View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.658        
cufflinks 131.328     High High
cufflinks 48.914     High High
cufflinks 32.672     High  
cufflinks 3.194        
cufflinks 17.897     High  
cufflinks 30.126     High  
cufflinks 25.91     High  
cufflinks 7.686        
cufflinks 6.892        
cufflinks 3.129        
cufflinks 4.322        
cufflinks 5.739        
cufflinks 3.47        
cufflinks 16.225     High  
cufflinks 93.104     High High
cufflinks 30.811     High  
cufflinks 27.921     High  
cufflinks 47.693     High High
cufflinks 41.735     High High
cufflinks 2.833        
cufflinks 2.553       Low
cufflinks 4.008        
cufflinks 3.435        
cufflinks 89.442     High High
cufflinks 96.701     High High
cufflinks 3.937        
cufflinks 30.077     High  
cufflinks 8.618        
cufflinks 11.749        

0 Strain