Gene : Sobic.006G173700 S. bicolor v3.1.1
Defline:  (1 of 5) K17686 - Cu+-exporting ATPase (copA, ATP7) Genomic Order:  1817
Name:  ? Sobic.006G173700 Secondary Identifier:  ? PAC:37946021
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G173700 0.5kb upstream 0.5kb upstream 8915 true Chr06: 52964029-52972943 Sorghum bicolor
Sobic.006G173700 0.5kb upstream 0.5kb upstream 500 false Chr06: 52964029-52964528 Sorghum bicolor
Sobic.006G173700 0.5kb downstream 0.5kb downstream 8915 true Chr06: 52964529-52973443 Sorghum bicolor
Sobic.006G173700 0.5kb downstream 0.5kb downstream 500 false Chr06: 52972944-52973443 Sorghum bicolor
Sobic.006G173700 1.0kb upstream 1.0kb upstream 9415 true Chr06: 52963529-52972943 Sorghum bicolor
Sobic.006G173700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52963529-52964528 Sorghum bicolor
Sobic.006G173700 1.0kb downstream 1.0kb downstream 9415 true Chr06: 52964529-52973943 Sorghum bicolor
Sobic.006G173700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52972944-52973943 Sorghum bicolor
Sobic.006G173700 2.0kb upstream 2.0kb upstream 10415 true Chr06: 52962529-52972943 Sorghum bicolor
Sobic.006G173700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52962529-52964528 Sorghum bicolor
Sobic.006G173700 2.0kb downstream 2.0kb downstream 10415 true Chr06: 52964529-52974943 Sorghum bicolor
Sobic.006G173700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52972944-52974943 Sorghum bicolor
Sobic.006G173700 5.0kb upstream 5.0kb upstream 13415 true Chr06: 52959529-52972943 Sorghum bicolor
Sobic.006G173700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52959529-52964528 Sorghum bicolor
Sobic.006G173700 5.0kb downstream 5.0kb downstream 13415 true Chr06: 52964529-52977943 Sorghum bicolor
Sobic.006G173700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52972944-52977943 Sorghum bicolor
Sobic.006G173700 10.0kb upstream 10.0kb upstream 18415 true Chr06: 52954529-52972943 Sorghum bicolor
Sobic.006G173700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52954529-52964528 Sorghum bicolor
Sobic.006G173700 10.0kb downstream 10.0kb downstream 18415 true Chr06: 52964529-52982943 Sorghum bicolor
Sobic.006G173700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52972944-52982943 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176426 5267 Panicoideae View MSA
124570086 5269 Grass View MSA
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low Low
cufflinks 0.777        
cufflinks 1.951        
cufflinks 4.199        
cufflinks 0.193       Low
cufflinks 2.446        
cufflinks 1.05        
cufflinks 1.973        
cufflinks 13.098     High High
cufflinks 4.477        
cufflinks 4.387        
cufflinks 3.862        
cufflinks 5.196       High
cufflinks 2.387        
cufflinks 0.86        
cufflinks 2.604        
cufflinks 1.182        
cufflinks 1.13        
cufflinks 1.405        
cufflinks 1.792        
cufflinks 0.013     Low Low
cufflinks 1.018        
cufflinks 2.639        
cufflinks 2.202        
cufflinks 1.265        
cufflinks 1.425        
cufflinks 2.79        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.262        
cufflinks 0.351        

0 Strain