Gene : Sobic.006G104900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Genomic Order:  1088
Name:  ? Sobic.006G104900 Secondary Identifier:  ? PAC:37947676
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY66-422 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G104900 0.5kb upstream 0.5kb upstream 3891 true Chr06: 47475846-47479736 Sorghum bicolor
Sobic.006G104900 0.5kb upstream 0.5kb upstream 500 false Chr06: 47475846-47476345 Sorghum bicolor
Sobic.006G104900 0.5kb downstream 0.5kb downstream 3891 true Chr06: 47476346-47480236 Sorghum bicolor
Sobic.006G104900 0.5kb downstream 0.5kb downstream 500 false Chr06: 47479737-47480236 Sorghum bicolor
Sobic.006G104900 1.0kb upstream 1.0kb upstream 4391 true Chr06: 47475346-47479736 Sorghum bicolor
Sobic.006G104900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47475346-47476345 Sorghum bicolor
Sobic.006G104900 1.0kb downstream 1.0kb downstream 4391 true Chr06: 47476346-47480736 Sorghum bicolor
Sobic.006G104900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47479737-47480736 Sorghum bicolor
Sobic.006G104900 2.0kb upstream 2.0kb upstream 5391 true Chr06: 47474346-47479736 Sorghum bicolor
Sobic.006G104900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47474346-47476345 Sorghum bicolor
Sobic.006G104900 2.0kb downstream 2.0kb downstream 5391 true Chr06: 47476346-47481736 Sorghum bicolor
Sobic.006G104900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47479737-47481736 Sorghum bicolor
Sobic.006G104900 5.0kb upstream 5.0kb upstream 8391 true Chr06: 47471346-47479736 Sorghum bicolor
Sobic.006G104900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47471346-47476345 Sorghum bicolor
Sobic.006G104900 5.0kb downstream 5.0kb downstream 8391 true Chr06: 47476346-47484736 Sorghum bicolor
Sobic.006G104900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47479737-47484736 Sorghum bicolor
Sobic.006G104900 10.0kb upstream 10.0kb upstream 13391 true Chr06: 47466346-47479736 Sorghum bicolor
Sobic.006G104900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47466346-47476345 Sorghum bicolor
Sobic.006G104900 10.0kb downstream 10.0kb downstream 13391 true Chr06: 47476346-47489736 Sorghum bicolor
Sobic.006G104900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47479737-47489736 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194211 5267 Panicoideae View MSA
124589656 5269 Grass View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.036     High High
cufflinks 0.263       Low
cufflinks 0.889        
cufflinks 1.076        
cufflinks 0.554        
cufflinks 1.873        
cufflinks 0.838        
cufflinks 0.272       Low
cufflinks 0.967        
cufflinks 0.989        
cufflinks 3.12       High
cufflinks 1.542        
cufflinks 0.224       Low
cufflinks 2.439        
cufflinks 0.796        
cufflinks 0.837        
cufflinks 0.753        
cufflinks 0.783        
cufflinks 0.785        
cufflinks 0.609        
cufflinks 0.372       Low
cufflinks 4.315       High
cufflinks 2.376        
cufflinks 2.402        
cufflinks 1.554        
cufflinks 0.291       Low
cufflinks 2.355        
cufflinks 2.297        
cufflinks 0.336       Low
cufflinks 0.983        

0 Strain