Gene : Sobic.002G329600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  3375
Name:  ? Sobic.002G329600 Secondary Identifier:  ? PAC:37951138
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G329600 0.5kb upstream 0.5kb upstream 1886 true Chr02: 69858482-69860367 Sorghum bicolor
Sobic.002G329600 0.5kb upstream 0.5kb upstream 500 false Chr02: 69858482-69858981 Sorghum bicolor
Sobic.002G329600 0.5kb downstream 0.5kb downstream 1886 true Chr02: 69858982-69860867 Sorghum bicolor
Sobic.002G329600 0.5kb downstream 0.5kb downstream 500 false Chr02: 69860368-69860867 Sorghum bicolor
Sobic.002G329600 1.0kb upstream 1.0kb upstream 2386 true Chr02: 69857982-69860367 Sorghum bicolor
Sobic.002G329600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 69857982-69858981 Sorghum bicolor
Sobic.002G329600 1.0kb downstream 1.0kb downstream 2386 true Chr02: 69858982-69861367 Sorghum bicolor
Sobic.002G329600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 69860368-69861367 Sorghum bicolor
Sobic.002G329600 2.0kb upstream 2.0kb upstream 3386 true Chr02: 69856982-69860367 Sorghum bicolor
Sobic.002G329600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 69856982-69858981 Sorghum bicolor
Sobic.002G329600 2.0kb downstream 2.0kb downstream 3386 true Chr02: 69858982-69862367 Sorghum bicolor
Sobic.002G329600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 69860368-69862367 Sorghum bicolor
Sobic.002G329600 5.0kb upstream 5.0kb upstream 6386 true Chr02: 69853982-69860367 Sorghum bicolor
Sobic.002G329600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 69853982-69858981 Sorghum bicolor
Sobic.002G329600 5.0kb downstream 5.0kb downstream 6386 true Chr02: 69858982-69865367 Sorghum bicolor
Sobic.002G329600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 69860368-69865367 Sorghum bicolor
Sobic.002G329600 10.0kb upstream 10.0kb upstream 11386 true Chr02: 69848982-69860367 Sorghum bicolor
Sobic.002G329600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 69848982-69858981 Sorghum bicolor
Sobic.002G329600 10.0kb downstream 10.0kb downstream 11386 true Chr02: 69858982-69870367 Sorghum bicolor
Sobic.002G329600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 69860368-69870367 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175316 5267 Panicoideae View MSA
124582476 5269 Grass View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.81        
cufflinks 1222.822     High High
cufflinks 188.517     High  
cufflinks 107.31     High  
cufflinks 11.143        
cufflinks 87.769     High  
cufflinks 357.393     High High
cufflinks 1487.007     High High
cufflinks 11.09        
cufflinks 6.533        
cufflinks 1.687       Low
cufflinks 1.341       Low
cufflinks 19.102     High  
cufflinks 1.782       Low
cufflinks 46.098     High  
cufflinks 747.203     High High
cufflinks 429.431     High High
cufflinks 382.93     High High
cufflinks 949.152     High High
cufflinks 237.316     High  
cufflinks 8.145        
cufflinks 0.926       Low
cufflinks 0.805       Low
cufflinks 1.218       Low
cufflinks 288.103     High  
cufflinks 1306.232     High High
cufflinks 0.918       Low
cufflinks 9.6        
cufflinks 650.985     High High
cufflinks 21.026     High  

0 Strain