Gene : Sobic.002G323600 S. bicolor v3.1.1
Defline:  weakly similar to Lipase (Class 3) family-like protein Genomic Order:  3315
Name:  ? Sobic.002G323600 Secondary Identifier:  ? PAC:37955074
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G323600 0.5kb upstream 0.5kb upstream 2226 true Chr02: 69472367-69474592 Sorghum bicolor
Sobic.002G323600 0.5kb upstream 0.5kb upstream 500 false Chr02: 69474093-69474592 Sorghum bicolor
Sobic.002G323600 0.5kb downstream 0.5kb downstream 2226 true Chr02: 69471867-69474092 Sorghum bicolor
Sobic.002G323600 0.5kb downstream 0.5kb downstream 500 false Chr02: 69471867-69472366 Sorghum bicolor
Sobic.002G323600 1.0kb upstream 1.0kb upstream 2726 true Chr02: 69472367-69475092 Sorghum bicolor
Sobic.002G323600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 69474093-69475092 Sorghum bicolor
Sobic.002G323600 1.0kb downstream 1.0kb downstream 2726 true Chr02: 69471367-69474092 Sorghum bicolor
Sobic.002G323600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 69471367-69472366 Sorghum bicolor
Sobic.002G323600 2.0kb upstream 2.0kb upstream 3726 true Chr02: 69472367-69476092 Sorghum bicolor
Sobic.002G323600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 69474093-69476092 Sorghum bicolor
Sobic.002G323600 2.0kb downstream 2.0kb downstream 3726 true Chr02: 69470367-69474092 Sorghum bicolor
Sobic.002G323600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 69470367-69472366 Sorghum bicolor
Sobic.002G323600 5.0kb upstream 5.0kb upstream 6726 true Chr02: 69472367-69479092 Sorghum bicolor
Sobic.002G323600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 69474093-69479092 Sorghum bicolor
Sobic.002G323600 5.0kb downstream 5.0kb downstream 6726 true Chr02: 69467367-69474092 Sorghum bicolor
Sobic.002G323600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 69467367-69472366 Sorghum bicolor
Sobic.002G323600 10.0kb upstream 10.0kb upstream 11726 true Chr02: 69472367-69484092 Sorghum bicolor
Sobic.002G323600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 69474093-69484092 Sorghum bicolor
Sobic.002G323600 10.0kb downstream 10.0kb downstream 11726 true Chr02: 69462367-69474092 Sorghum bicolor
Sobic.002G323600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 69462367-69472366 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995626 5273 Angiosperm View MSA
122181286 5267 Panicoideae View MSA
124589067 5269 Grass View MSA
121351664 5274 Embryophyte View MSA
123382268 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062        
cufflinks 0.009     Low Low
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.099        
cufflinks 0.279        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.187       High
cufflinks 1.414       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.035       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.093        
cufflinks 0.009     Low Low
cufflinks 0.075     Low  
cufflinks 0.312        
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.263        
cufflinks 0.912       High
cufflinks 1.428       High
cufflinks 1.173       High
cufflinks 0.668        
cufflinks 0.885       High
cufflinks 0.026     Low  
cufflinks 0.01     Low Low
cufflinks 0.016     Low Low

0 Strain