Gene : Sobic.002G325400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12202//PTHR12202:SF0 - UNCHARACTERIZED // PROTEIN F58B3.4 Genomic Order:  3332
Name:  ? Sobic.002G325400 Secondary Identifier:  ? PAC:37949725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G325400 0.5kb upstream 0.5kb upstream 6108 true Chr02: 69571441-69577548 Sorghum bicolor
Sobic.002G325400 0.5kb upstream 0.5kb upstream 500 false Chr02: 69571441-69571940 Sorghum bicolor
Sobic.002G325400 0.5kb downstream 0.5kb downstream 6108 true Chr02: 69571941-69578048 Sorghum bicolor
Sobic.002G325400 0.5kb downstream 0.5kb downstream 500 false Chr02: 69577549-69578048 Sorghum bicolor
Sobic.002G325400 1.0kb upstream 1.0kb upstream 6608 true Chr02: 69570941-69577548 Sorghum bicolor
Sobic.002G325400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 69570941-69571940 Sorghum bicolor
Sobic.002G325400 1.0kb downstream 1.0kb downstream 6608 true Chr02: 69571941-69578548 Sorghum bicolor
Sobic.002G325400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 69577549-69578548 Sorghum bicolor
Sobic.002G325400 2.0kb upstream 2.0kb upstream 7608 true Chr02: 69569941-69577548 Sorghum bicolor
Sobic.002G325400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 69569941-69571940 Sorghum bicolor
Sobic.002G325400 2.0kb downstream 2.0kb downstream 7608 true Chr02: 69571941-69579548 Sorghum bicolor
Sobic.002G325400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 69577549-69579548 Sorghum bicolor
Sobic.002G325400 5.0kb upstream 5.0kb upstream 10608 true Chr02: 69566941-69577548 Sorghum bicolor
Sobic.002G325400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 69566941-69571940 Sorghum bicolor
Sobic.002G325400 5.0kb downstream 5.0kb downstream 10608 true Chr02: 69571941-69582548 Sorghum bicolor
Sobic.002G325400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 69577549-69582548 Sorghum bicolor
Sobic.002G325400 10.0kb upstream 10.0kb upstream 15608 true Chr02: 69561941-69577548 Sorghum bicolor
Sobic.002G325400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 69561941-69571940 Sorghum bicolor
Sobic.002G325400 10.0kb downstream 10.0kb downstream 15608 true Chr02: 69571941-69587548 Sorghum bicolor
Sobic.002G325400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 69577549-69587548 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177517 5267 Panicoideae View MSA
124575777 5269 Grass View MSA
122046385 5273 Angiosperm View MSA
121346233 5274 Embryophyte View MSA
123423804 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.716     High High
cufflinks 1.066       Low
cufflinks 3.576        
cufflinks 5.739        
cufflinks 8.116        
cufflinks 4.98        
cufflinks 5.373        
cufflinks 1.098       Low
cufflinks 8.743        
cufflinks 7.676        
cufflinks 6.833        
cufflinks 8.364        
cufflinks 5.609        
cufflinks 9.103        
cufflinks 5.801        
cufflinks 2.384       Low
cufflinks 6.173        
cufflinks 6.729        
cufflinks 5.472        
cufflinks 6.521        
cufflinks 16.085     High High
cufflinks 8.821        
cufflinks 9.473        
cufflinks 9.635        
cufflinks 2.577       Low
cufflinks 1.14       Low
cufflinks 6.161        
cufflinks 9.502        
cufflinks 4.396        
cufflinks 9.751        

0 Strain