Gene : Sobic.006G109000 S. bicolor v3.1.1
Defline:  (1 of 8) KOG4473 - Uncharacterized membrane protein Genomic Order:  1133
Name:  ? Sobic.006G109000 Secondary Identifier:  ? PAC:37946231
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G109000 0.5kb upstream 0.5kb upstream 2866 true Chr06: 47822129-47824994 Sorghum bicolor
Sobic.006G109000 0.5kb upstream 0.5kb upstream 500 false Chr06: 47824495-47824994 Sorghum bicolor
Sobic.006G109000 0.5kb downstream 0.5kb downstream 2866 true Chr06: 47821629-47824494 Sorghum bicolor
Sobic.006G109000 0.5kb downstream 0.5kb downstream 500 false Chr06: 47821629-47822128 Sorghum bicolor
Sobic.006G109000 1.0kb upstream 1.0kb upstream 3366 true Chr06: 47822129-47825494 Sorghum bicolor
Sobic.006G109000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47824495-47825494 Sorghum bicolor
Sobic.006G109000 1.0kb downstream 1.0kb downstream 3366 true Chr06: 47821129-47824494 Sorghum bicolor
Sobic.006G109000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47821129-47822128 Sorghum bicolor
Sobic.006G109000 2.0kb upstream 2.0kb upstream 4366 true Chr06: 47822129-47826494 Sorghum bicolor
Sobic.006G109000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47824495-47826494 Sorghum bicolor
Sobic.006G109000 2.0kb downstream 2.0kb downstream 4366 true Chr06: 47820129-47824494 Sorghum bicolor
Sobic.006G109000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47820129-47822128 Sorghum bicolor
Sobic.006G109000 5.0kb upstream 5.0kb upstream 7366 true Chr06: 47822129-47829494 Sorghum bicolor
Sobic.006G109000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47824495-47829494 Sorghum bicolor
Sobic.006G109000 5.0kb downstream 5.0kb downstream 7366 true Chr06: 47817129-47824494 Sorghum bicolor
Sobic.006G109000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47817129-47822128 Sorghum bicolor
Sobic.006G109000 10.0kb upstream 10.0kb upstream 12366 true Chr06: 47822129-47834494 Sorghum bicolor
Sobic.006G109000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47824495-47834494 Sorghum bicolor
Sobic.006G109000 10.0kb downstream 10.0kb downstream 12366 true Chr06: 47812129-47824494 Sorghum bicolor
Sobic.006G109000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47812129-47822128 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179307 5267 Panicoideae View MSA
124574925 5269 Grass View MSA
122043117 5273 Angiosperm View MSA
121348483 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.348        
cufflinks 2.307        
cufflinks 2.214        
cufflinks 2.383        
cufflinks 5.829       High
cufflinks 3.087        
cufflinks 7.129       High
cufflinks 5.858       High
cufflinks 2.226        
cufflinks 2.253        
cufflinks 1.301       Low
cufflinks 1.797        
cufflinks 2.374        
cufflinks 1.717        
cufflinks 4.721        
cufflinks 4.152        
cufflinks 7.646       High
cufflinks 7.513       High
cufflinks 2.342        
cufflinks 7.617       High
cufflinks 1.811        
cufflinks 1.79        
cufflinks 1.543       Low
cufflinks 1.469       Low
cufflinks 5.293       High
cufflinks 4.007        
cufflinks 1.347       Low
cufflinks 6.201       High
cufflinks 7.035       High
cufflinks 3.073        

0 Strain