Gene : Sobic.002G320100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12668//PTHR12668:SF14 - TRANSMEMBRANE PROTEIN 14, 15 // SUBFAMILY NOT NAMED Genomic Order:  3280
Name:  ? Sobic.002G320100 Secondary Identifier:  ? PAC:37953141
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G320100 0.5kb upstream 0.5kb upstream 3506 true Chr02: 69170818-69174323 Sorghum bicolor
Sobic.002G320100 0.5kb upstream 0.5kb upstream 500 false Chr02: 69170818-69171317 Sorghum bicolor
Sobic.002G320100 0.5kb downstream 0.5kb downstream 3506 true Chr02: 69171318-69174823 Sorghum bicolor
Sobic.002G320100 0.5kb downstream 0.5kb downstream 500 false Chr02: 69174324-69174823 Sorghum bicolor
Sobic.002G320100 1.0kb upstream 1.0kb upstream 4006 true Chr02: 69170318-69174323 Sorghum bicolor
Sobic.002G320100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 69170318-69171317 Sorghum bicolor
Sobic.002G320100 1.0kb downstream 1.0kb downstream 4006 true Chr02: 69171318-69175323 Sorghum bicolor
Sobic.002G320100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 69174324-69175323 Sorghum bicolor
Sobic.002G320100 2.0kb upstream 2.0kb upstream 5006 true Chr02: 69169318-69174323 Sorghum bicolor
Sobic.002G320100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 69169318-69171317 Sorghum bicolor
Sobic.002G320100 2.0kb downstream 2.0kb downstream 5006 true Chr02: 69171318-69176323 Sorghum bicolor
Sobic.002G320100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 69174324-69176323 Sorghum bicolor
Sobic.002G320100 5.0kb upstream 5.0kb upstream 8006 true Chr02: 69166318-69174323 Sorghum bicolor
Sobic.002G320100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 69166318-69171317 Sorghum bicolor
Sobic.002G320100 5.0kb downstream 5.0kb downstream 8006 true Chr02: 69171318-69179323 Sorghum bicolor
Sobic.002G320100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 69174324-69179323 Sorghum bicolor
Sobic.002G320100 10.0kb upstream 10.0kb upstream 13006 true Chr02: 69161318-69174323 Sorghum bicolor
Sobic.002G320100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 69161318-69171317 Sorghum bicolor
Sobic.002G320100 10.0kb downstream 10.0kb downstream 13006 true Chr02: 69171318-69184323 Sorghum bicolor
Sobic.002G320100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 69174324-69184323 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192001 5267 Panicoideae View MSA
124586519 5269 Grass View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.593     High High
cufflinks 2.45       Low
cufflinks 3.429        
cufflinks 7.435        
cufflinks 4.432        
cufflinks 15.688     High High
cufflinks 3.347        
cufflinks 2.128       Low
cufflinks 7.921        
cufflinks 7.332        
cufflinks 5.255        
cufflinks 6.382        
cufflinks 6.624        
cufflinks 7.676        
cufflinks 5.146        
cufflinks 3.945        
cufflinks 3.328        
cufflinks 4.047        
cufflinks 4.403        
cufflinks 4.927        
cufflinks 7.363        
cufflinks 8.07        
cufflinks 6.186        
cufflinks 6.305        
cufflinks 2.85       Low
cufflinks 2.079       Low
cufflinks 4.326        
cufflinks 13.236     High High
cufflinks 2.52       Low
cufflinks 5.391        

0 Strain