Gene : Sobic.006G112700 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR14513 - PROTECTION OF TELOMERES 1 Genomic Order:  1169
Name:  ? Sobic.006G112700 Secondary Identifier:  ? PAC:37947427
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G112700 0.5kb upstream 0.5kb upstream 5796 true Chr06: 48083812-48089607 Sorghum bicolor
Sobic.006G112700 0.5kb upstream 0.5kb upstream 500 false Chr06: 48089108-48089607 Sorghum bicolor
Sobic.006G112700 0.5kb downstream 0.5kb downstream 5796 true Chr06: 48083312-48089107 Sorghum bicolor
Sobic.006G112700 0.5kb downstream 0.5kb downstream 500 false Chr06: 48083312-48083811 Sorghum bicolor
Sobic.006G112700 1.0kb upstream 1.0kb upstream 6296 true Chr06: 48083812-48090107 Sorghum bicolor
Sobic.006G112700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48089108-48090107 Sorghum bicolor
Sobic.006G112700 1.0kb downstream 1.0kb downstream 6296 true Chr06: 48082812-48089107 Sorghum bicolor
Sobic.006G112700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48082812-48083811 Sorghum bicolor
Sobic.006G112700 2.0kb upstream 2.0kb upstream 7296 true Chr06: 48083812-48091107 Sorghum bicolor
Sobic.006G112700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48089108-48091107 Sorghum bicolor
Sobic.006G112700 2.0kb downstream 2.0kb downstream 7296 true Chr06: 48081812-48089107 Sorghum bicolor
Sobic.006G112700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48081812-48083811 Sorghum bicolor
Sobic.006G112700 5.0kb upstream 5.0kb upstream 10296 true Chr06: 48083812-48094107 Sorghum bicolor
Sobic.006G112700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48089108-48094107 Sorghum bicolor
Sobic.006G112700 5.0kb downstream 5.0kb downstream 10296 true Chr06: 48078812-48089107 Sorghum bicolor
Sobic.006G112700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48078812-48083811 Sorghum bicolor
Sobic.006G112700 10.0kb upstream 10.0kb upstream 15296 true Chr06: 48083812-48099107 Sorghum bicolor
Sobic.006G112700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48089108-48099107 Sorghum bicolor
Sobic.006G112700 10.0kb downstream 10.0kb downstream 15296 true Chr06: 48073812-48089107 Sorghum bicolor
Sobic.006G112700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48073812-48083811 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178580 5267 Panicoideae View MSA
124572897 5269 Grass View MSA
122044561 5273 Angiosperm View MSA
121346755 5274 Embryophyte View MSA
123426673 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.581        
cufflinks 0.315       Low
cufflinks 0.945        
cufflinks 1.679        
cufflinks 4.104       High
cufflinks 2.477        
cufflinks 2.025        
cufflinks 0.415       Low
cufflinks 1.964        
cufflinks 2.765        
cufflinks 1.85        
cufflinks 2.121        
cufflinks 2.395        
cufflinks 1.572        
cufflinks 2.896        
cufflinks 0.6       Low
cufflinks 1.684        
cufflinks 2.124        
cufflinks 0.649       Low
cufflinks 1.928        
cufflinks 9.38       High
cufflinks 1.556        
cufflinks 1.861        
cufflinks 1.84        
cufflinks 0.696       Low
cufflinks 0.232       Low
cufflinks 1.744        
cufflinks 0.837        
cufflinks 1.215        
cufflinks 3.721       High

0 Strain