Gene : Sobic.002G317600 S. bicolor v3.1.1
Defline:  (1 of 1) 3.5.99.10 - 2-iminobutanoate/2-iminopropanoate deaminase / Enamine/imine deaminase Genomic Order:  3255
Name:  ? Sobic.002G317600 Secondary Identifier:  ? PAC:37952124
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY0-1535 Sorghum bicolor pathologic  
Sbicolor PWY-6196 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G317600 0.5kb upstream 0.5kb upstream 3243 true Chr02: 69020811-69024053 Sorghum bicolor
Sobic.002G317600 0.5kb upstream 0.5kb upstream 500 false Chr02: 69020811-69021310 Sorghum bicolor
Sobic.002G317600 0.5kb downstream 0.5kb downstream 3243 true Chr02: 69021311-69024553 Sorghum bicolor
Sobic.002G317600 0.5kb downstream 0.5kb downstream 500 false Chr02: 69024054-69024553 Sorghum bicolor
Sobic.002G317600 1.0kb upstream 1.0kb upstream 3743 true Chr02: 69020311-69024053 Sorghum bicolor
Sobic.002G317600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 69020311-69021310 Sorghum bicolor
Sobic.002G317600 1.0kb downstream 1.0kb downstream 3743 true Chr02: 69021311-69025053 Sorghum bicolor
Sobic.002G317600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 69024054-69025053 Sorghum bicolor
Sobic.002G317600 2.0kb upstream 2.0kb upstream 4743 true Chr02: 69019311-69024053 Sorghum bicolor
Sobic.002G317600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 69019311-69021310 Sorghum bicolor
Sobic.002G317600 2.0kb downstream 2.0kb downstream 4743 true Chr02: 69021311-69026053 Sorghum bicolor
Sobic.002G317600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 69024054-69026053 Sorghum bicolor
Sobic.002G317600 5.0kb upstream 5.0kb upstream 7743 true Chr02: 69016311-69024053 Sorghum bicolor
Sobic.002G317600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 69016311-69021310 Sorghum bicolor
Sobic.002G317600 5.0kb downstream 5.0kb downstream 7743 true Chr02: 69021311-69029053 Sorghum bicolor
Sobic.002G317600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 69024054-69029053 Sorghum bicolor
Sobic.002G317600 10.0kb upstream 10.0kb upstream 12743 true Chr02: 69011311-69024053 Sorghum bicolor
Sobic.002G317600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 69011311-69021310 Sorghum bicolor
Sobic.002G317600 10.0kb downstream 10.0kb downstream 12743 true Chr02: 69021311-69034053 Sorghum bicolor
Sobic.002G317600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 69024054-69034053 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179932 5267 Panicoideae View MSA
124580300 5269 Grass View MSA
122047773 5273 Angiosperm View MSA
121349412 5274 Embryophyte View MSA
123426885 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.007        
cufflinks 0.91       Low
cufflinks 1.008       Low
cufflinks 2.229        
cufflinks 8.412        
cufflinks 3.246        
cufflinks 7.366        
cufflinks 3.113        
cufflinks 3.352        
cufflinks 3.931        
cufflinks 5.438        
cufflinks 4.794        
cufflinks 2.732        
cufflinks 7.065        
cufflinks 4.53        
cufflinks 1.336       Low
cufflinks 8.588        
cufflinks 9.214        
cufflinks 0.983       Low
cufflinks 4.664        
cufflinks 14.133       High
cufflinks 7.668        
cufflinks 6.803        
cufflinks 6.53        
cufflinks 0.759       Low
cufflinks 0.845       Low
cufflinks 5.066        
cufflinks 6.711        
cufflinks 10.74       High
cufflinks 8.431        

0 Strain