Gene : Sobic.002G317800 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR33307:SF2 - BNR/ASP-BOX REPEAT FAMILY PROTEIN Genomic Order:  3257
Name:  ? Sobic.002G317800 Secondary Identifier:  ? PAC:37950624
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G317800 0.5kb upstream 0.5kb upstream 3245 true Chr02: 69029232-69032476 Sorghum bicolor
Sobic.002G317800 0.5kb upstream 0.5kb upstream 500 false Chr02: 69029232-69029731 Sorghum bicolor
Sobic.002G317800 0.5kb downstream 0.5kb downstream 3245 true Chr02: 69029732-69032976 Sorghum bicolor
Sobic.002G317800 0.5kb downstream 0.5kb downstream 500 false Chr02: 69032477-69032976 Sorghum bicolor
Sobic.002G317800 1.0kb upstream 1.0kb upstream 3745 true Chr02: 69028732-69032476 Sorghum bicolor
Sobic.002G317800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 69028732-69029731 Sorghum bicolor
Sobic.002G317800 1.0kb downstream 1.0kb downstream 3745 true Chr02: 69029732-69033476 Sorghum bicolor
Sobic.002G317800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 69032477-69033476 Sorghum bicolor
Sobic.002G317800 2.0kb upstream 2.0kb upstream 4745 true Chr02: 69027732-69032476 Sorghum bicolor
Sobic.002G317800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 69027732-69029731 Sorghum bicolor
Sobic.002G317800 2.0kb downstream 2.0kb downstream 4745 true Chr02: 69029732-69034476 Sorghum bicolor
Sobic.002G317800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 69032477-69034476 Sorghum bicolor
Sobic.002G317800 5.0kb upstream 5.0kb upstream 7745 true Chr02: 69024732-69032476 Sorghum bicolor
Sobic.002G317800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 69024732-69029731 Sorghum bicolor
Sobic.002G317800 5.0kb downstream 5.0kb downstream 7745 true Chr02: 69029732-69037476 Sorghum bicolor
Sobic.002G317800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 69032477-69037476 Sorghum bicolor
Sobic.002G317800 10.0kb upstream 10.0kb upstream 12745 true Chr02: 69019732-69032476 Sorghum bicolor
Sobic.002G317800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 69019732-69029731 Sorghum bicolor
Sobic.002G317800 10.0kb downstream 10.0kb downstream 12745 true Chr02: 69029732-69042476 Sorghum bicolor
Sobic.002G317800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 69032477-69042476 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194915 5267 Panicoideae View MSA
124591075 5269 Grass View MSA
122044355 5273 Angiosperm View MSA
121343996 5274 Embryophyte View MSA
123425973 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.351       Low
cufflinks 2.899       Low
cufflinks 13.536     High  
cufflinks 12.438     High  
cufflinks 15.557     High  
cufflinks 6.103        
cufflinks 15.724     High  
cufflinks 8.612     High  
cufflinks 24.606     High  
cufflinks 17.993     High  
cufflinks 19.604     High  
cufflinks 16.607     High  
cufflinks 14.927     High  
cufflinks 16.757     High  
cufflinks 11.257        
cufflinks 11.959     High  
cufflinks 14.294     High  
cufflinks 16.196     High  
cufflinks 10.764        
cufflinks 23.604     High  
cufflinks 17.502     High  
cufflinks 12.404     High  
cufflinks 16.746     High  
cufflinks 16.043     High  
cufflinks 14.414     High  
cufflinks 4.214        
cufflinks 18.162     High  
cufflinks 0.041     Low Low
cufflinks 13.473     High  
cufflinks 14.34     High  

0 Strain