Gene : Sobic.002G317700 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR33307:SF2 - BNR/ASP-BOX REPEAT FAMILY PROTEIN Genomic Order:  3256
Name:  ? Sobic.002G317700 Secondary Identifier:  ? PAC:37951845
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G317700 0.5kb upstream 0.5kb upstream 2372 true Chr02: 69025657-69028028 Sorghum bicolor
Sobic.002G317700 0.5kb upstream 0.5kb upstream 500 false Chr02: 69025657-69026156 Sorghum bicolor
Sobic.002G317700 0.5kb downstream 0.5kb downstream 2372 true Chr02: 69026157-69028528 Sorghum bicolor
Sobic.002G317700 0.5kb downstream 0.5kb downstream 500 false Chr02: 69028029-69028528 Sorghum bicolor
Sobic.002G317700 1.0kb upstream 1.0kb upstream 2872 true Chr02: 69025157-69028028 Sorghum bicolor
Sobic.002G317700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 69025157-69026156 Sorghum bicolor
Sobic.002G317700 1.0kb downstream 1.0kb downstream 2872 true Chr02: 69026157-69029028 Sorghum bicolor
Sobic.002G317700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 69028029-69029028 Sorghum bicolor
Sobic.002G317700 2.0kb upstream 2.0kb upstream 3872 true Chr02: 69024157-69028028 Sorghum bicolor
Sobic.002G317700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 69024157-69026156 Sorghum bicolor
Sobic.002G317700 2.0kb downstream 2.0kb downstream 3872 true Chr02: 69026157-69030028 Sorghum bicolor
Sobic.002G317700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 69028029-69030028 Sorghum bicolor
Sobic.002G317700 5.0kb upstream 5.0kb upstream 6872 true Chr02: 69021157-69028028 Sorghum bicolor
Sobic.002G317700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 69021157-69026156 Sorghum bicolor
Sobic.002G317700 5.0kb downstream 5.0kb downstream 6872 true Chr02: 69026157-69033028 Sorghum bicolor
Sobic.002G317700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 69028029-69033028 Sorghum bicolor
Sobic.002G317700 10.0kb upstream 10.0kb upstream 11872 true Chr02: 69016157-69028028 Sorghum bicolor
Sobic.002G317700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 69016157-69026156 Sorghum bicolor
Sobic.002G317700 10.0kb downstream 10.0kb downstream 11872 true Chr02: 69026157-69038028 Sorghum bicolor
Sobic.002G317700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 69028029-69038028 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194915 5267 Panicoideae View MSA
124591075 5269 Grass View MSA
122044355 5273 Angiosperm View MSA
121343996 5274 Embryophyte View MSA
123425973 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.238       Low
cufflinks 0.218       Low
cufflinks 0.275       Low
cufflinks 0.213       Low
cufflinks 10.458       High
cufflinks 0.49       Low
cufflinks 2.492        
cufflinks 1.607        
cufflinks 1.76        
cufflinks 1.983        
cufflinks 1.922        
cufflinks 2.706        
cufflinks 3.568        
cufflinks 2.524        
cufflinks 6.538       High
cufflinks 0.328       Low
cufflinks 2.447        
cufflinks 2.239        
cufflinks 0.811        
cufflinks 3.037        
cufflinks 10.008       High
cufflinks 1.806        
cufflinks 1.413        
cufflinks 1.359        
cufflinks 0.288       Low
cufflinks 0.45       Low
cufflinks 1.329        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.954        
cufflinks 8.819       High

0 Strain