Gene : Sobic.002G312400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23423//PTHR23423:SF15 - ORGANIC SOLUTE TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3201
Name:  ? Sobic.002G312400 Secondary Identifier:  ? PAC:37955039
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G312400 0.5kb upstream 0.5kb upstream 6911 true Chr02: 68589361-68596271 Sorghum bicolor
Sobic.002G312400 0.5kb upstream 0.5kb upstream 500 false Chr02: 68595772-68596271 Sorghum bicolor
Sobic.002G312400 0.5kb downstream 0.5kb downstream 6911 true Chr02: 68588861-68595771 Sorghum bicolor
Sobic.002G312400 0.5kb downstream 0.5kb downstream 500 false Chr02: 68588861-68589360 Sorghum bicolor
Sobic.002G312400 1.0kb upstream 1.0kb upstream 7411 true Chr02: 68589361-68596771 Sorghum bicolor
Sobic.002G312400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 68595772-68596771 Sorghum bicolor
Sobic.002G312400 1.0kb downstream 1.0kb downstream 7411 true Chr02: 68588361-68595771 Sorghum bicolor
Sobic.002G312400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 68588361-68589360 Sorghum bicolor
Sobic.002G312400 2.0kb upstream 2.0kb upstream 8411 true Chr02: 68589361-68597771 Sorghum bicolor
Sobic.002G312400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 68595772-68597771 Sorghum bicolor
Sobic.002G312400 2.0kb downstream 2.0kb downstream 8411 true Chr02: 68587361-68595771 Sorghum bicolor
Sobic.002G312400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 68587361-68589360 Sorghum bicolor
Sobic.002G312400 5.0kb upstream 5.0kb upstream 11411 true Chr02: 68589361-68600771 Sorghum bicolor
Sobic.002G312400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 68595772-68600771 Sorghum bicolor
Sobic.002G312400 5.0kb downstream 5.0kb downstream 11411 true Chr02: 68584361-68595771 Sorghum bicolor
Sobic.002G312400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 68584361-68589360 Sorghum bicolor
Sobic.002G312400 10.0kb upstream 10.0kb upstream 16411 true Chr02: 68589361-68605771 Sorghum bicolor
Sobic.002G312400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 68595772-68605771 Sorghum bicolor
Sobic.002G312400 10.0kb downstream 10.0kb downstream 16411 true Chr02: 68579361-68595771 Sorghum bicolor
Sobic.002G312400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 68579361-68589360 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176039 5267 Panicoideae View MSA
124571587 5269 Grass View MSA
122044930 5273 Angiosperm View MSA
121344114 5274 Embryophyte View MSA
123379976 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.143     High  
cufflinks 69.649     High High
cufflinks 79.393     High High
cufflinks 105.971     High High
cufflinks 20.922     High  
cufflinks 16.294     High Low
cufflinks 22.296     High  
cufflinks 27.734     High  
cufflinks 24.593     High  
cufflinks 23.233     High  
cufflinks 24.652     High  
cufflinks 26.12     High  
cufflinks 22.056     High  
cufflinks 28.37     High  
cufflinks 37.099     High  
cufflinks 54.642     High High
cufflinks 26.172     High  
cufflinks 23.514     High  
cufflinks 30.299     High  
cufflinks 35.705     High  
cufflinks 18.222     High Low
cufflinks 22.802     High  
cufflinks 25.259     High  
cufflinks 22.297     High  
cufflinks 26.543     High  
cufflinks 24.059     High  
cufflinks 73.703     High High
cufflinks 37.498     High  
cufflinks 12.628     High Low
cufflinks 31.573     High  

0 Strain