Gene : Sobic.006G115100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12668//PTHR12668:SF16 - TRANSMEMBRANE PROTEIN 14, 15 // SUBFAMILY NOT NAMED Genomic Order:  1196
Name:  ? Sobic.006G115100 Secondary Identifier:  ? PAC:37946608
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G115100 0.5kb upstream 0.5kb upstream 2988 true Chr06: 48283385-48286372 Sorghum bicolor
Sobic.006G115100 0.5kb upstream 0.5kb upstream 500 false Chr06: 48285873-48286372 Sorghum bicolor
Sobic.006G115100 0.5kb downstream 0.5kb downstream 2988 true Chr06: 48282885-48285872 Sorghum bicolor
Sobic.006G115100 0.5kb downstream 0.5kb downstream 500 false Chr06: 48282885-48283384 Sorghum bicolor
Sobic.006G115100 1.0kb upstream 1.0kb upstream 3488 true Chr06: 48283385-48286872 Sorghum bicolor
Sobic.006G115100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48285873-48286872 Sorghum bicolor
Sobic.006G115100 1.0kb downstream 1.0kb downstream 3488 true Chr06: 48282385-48285872 Sorghum bicolor
Sobic.006G115100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48282385-48283384 Sorghum bicolor
Sobic.006G115100 2.0kb upstream 2.0kb upstream 4488 true Chr06: 48283385-48287872 Sorghum bicolor
Sobic.006G115100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48285873-48287872 Sorghum bicolor
Sobic.006G115100 2.0kb downstream 2.0kb downstream 4488 true Chr06: 48281385-48285872 Sorghum bicolor
Sobic.006G115100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48281385-48283384 Sorghum bicolor
Sobic.006G115100 5.0kb upstream 5.0kb upstream 7488 true Chr06: 48283385-48290872 Sorghum bicolor
Sobic.006G115100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48285873-48290872 Sorghum bicolor
Sobic.006G115100 5.0kb downstream 5.0kb downstream 7488 true Chr06: 48278385-48285872 Sorghum bicolor
Sobic.006G115100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48278385-48283384 Sorghum bicolor
Sobic.006G115100 10.0kb upstream 10.0kb upstream 12488 true Chr06: 48283385-48295872 Sorghum bicolor
Sobic.006G115100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48285873-48295872 Sorghum bicolor
Sobic.006G115100 10.0kb downstream 10.0kb downstream 12488 true Chr06: 48273385-48285872 Sorghum bicolor
Sobic.006G115100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48273385-48283384 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178011 5267 Panicoideae View MSA
124576968 5269 Grass View MSA
122045627 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.001     High High
cufflinks 3.914        
cufflinks 6.101        
cufflinks 11.623       High
cufflinks 5.611        
cufflinks 5.975        
cufflinks 4.941        
cufflinks 1.945       Low
cufflinks 10.546       High
cufflinks 10.136       High
cufflinks 3.924        
cufflinks 4.869        
cufflinks 5.358        
cufflinks 5.33        
cufflinks 7.36        
cufflinks 8.808       High
cufflinks 5.491        
cufflinks 5.017        
cufflinks 3.744       Low
cufflinks 9.27       High
cufflinks 4.183        
cufflinks 5.781        
cufflinks 5.785        
cufflinks 5.914        
cufflinks 4.983        
cufflinks 4.281        
cufflinks 5.963        
cufflinks 11.928     High High
cufflinks 2.815       Low
cufflinks 8.477        

0 Strain