Gene : Sobic.006G115466 S. bicolor v3.1.1
Genomic Order:  1200 Name:  ? Sobic.006G115466
Secondary Identifier:  ? PAC:37946394
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G115466 0.5kb upstream 0.5kb upstream 2657 true Chr06: 48324509-48327165 Sorghum bicolor
Sobic.006G115466 0.5kb upstream 0.5kb upstream 500 false Chr06: 48326666-48327165 Sorghum bicolor
Sobic.006G115466 0.5kb downstream 0.5kb downstream 2657 true Chr06: 48324009-48326665 Sorghum bicolor
Sobic.006G115466 0.5kb downstream 0.5kb downstream 500 false Chr06: 48324009-48324508 Sorghum bicolor
Sobic.006G115466 1.0kb upstream 1.0kb upstream 3157 true Chr06: 48324509-48327665 Sorghum bicolor
Sobic.006G115466 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48326666-48327665 Sorghum bicolor
Sobic.006G115466 1.0kb downstream 1.0kb downstream 3157 true Chr06: 48323509-48326665 Sorghum bicolor
Sobic.006G115466 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48323509-48324508 Sorghum bicolor
Sobic.006G115466 2.0kb upstream 2.0kb upstream 4157 true Chr06: 48324509-48328665 Sorghum bicolor
Sobic.006G115466 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48326666-48328665 Sorghum bicolor
Sobic.006G115466 2.0kb downstream 2.0kb downstream 4157 true Chr06: 48322509-48326665 Sorghum bicolor
Sobic.006G115466 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48322509-48324508 Sorghum bicolor
Sobic.006G115466 5.0kb upstream 5.0kb upstream 7157 true Chr06: 48324509-48331665 Sorghum bicolor
Sobic.006G115466 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48326666-48331665 Sorghum bicolor
Sobic.006G115466 5.0kb downstream 5.0kb downstream 7157 true Chr06: 48319509-48326665 Sorghum bicolor
Sobic.006G115466 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48319509-48324508 Sorghum bicolor
Sobic.006G115466 10.0kb upstream 10.0kb upstream 12157 true Chr06: 48324509-48336665 Sorghum bicolor
Sobic.006G115466 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48326666-48336665 Sorghum bicolor
Sobic.006G115466 10.0kb downstream 10.0kb downstream 12157 true Chr06: 48314509-48326665 Sorghum bicolor
Sobic.006G115466 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48314509-48324508 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196371 5267 Panicoideae View MSA
124585911 5269 Grass View MSA
122049938 5273 Angiosperm View MSA
121311655 5274 Embryophyte View MSA
123348925 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.723       Low
cufflinks 6.362     High  
cufflinks 7.909        
cufflinks 7.661        
cufflinks 6.14        
cufflinks 10.569        
cufflinks 8.94        
cufflinks 8.749     High  
cufflinks 12.716     High High
cufflinks 12.57     High High
cufflinks 12.193     High High
cufflinks 18.675     High High
cufflinks 9.702        
cufflinks 9.354        
cufflinks 8.498        
cufflinks 6.45        
cufflinks 8.186        
cufflinks 8.313        
cufflinks 4.385       Low
cufflinks 12.868     High High
cufflinks 7.848        
cufflinks 6.598        
cufflinks 14.38     High High
cufflinks 11.656     High High
cufflinks 7.181        
cufflinks 7.173     High  
cufflinks 11.128        
cufflinks 8.67        
cufflinks 6.023        
cufflinks 8.296        

0 Strain