Gene : Sobic.006G118700 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  1233
Name:  ? Sobic.006G118700 Secondary Identifier:  ? PAC:37947803
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G118700 0.5kb upstream 0.5kb upstream 6783 true Chr06: 48590856-48597638 Sorghum bicolor
Sobic.006G118700 0.5kb upstream 0.5kb upstream 500 false Chr06: 48590856-48591355 Sorghum bicolor
Sobic.006G118700 0.5kb downstream 0.5kb downstream 6783 true Chr06: 48591356-48598138 Sorghum bicolor
Sobic.006G118700 0.5kb downstream 0.5kb downstream 500 false Chr06: 48597639-48598138 Sorghum bicolor
Sobic.006G118700 1.0kb upstream 1.0kb upstream 7283 true Chr06: 48590356-48597638 Sorghum bicolor
Sobic.006G118700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48590356-48591355 Sorghum bicolor
Sobic.006G118700 1.0kb downstream 1.0kb downstream 7283 true Chr06: 48591356-48598638 Sorghum bicolor
Sobic.006G118700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48597639-48598638 Sorghum bicolor
Sobic.006G118700 2.0kb upstream 2.0kb upstream 8283 true Chr06: 48589356-48597638 Sorghum bicolor
Sobic.006G118700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48589356-48591355 Sorghum bicolor
Sobic.006G118700 2.0kb downstream 2.0kb downstream 8283 true Chr06: 48591356-48599638 Sorghum bicolor
Sobic.006G118700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48597639-48599638 Sorghum bicolor
Sobic.006G118700 5.0kb upstream 5.0kb upstream 11283 true Chr06: 48586356-48597638 Sorghum bicolor
Sobic.006G118700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48586356-48591355 Sorghum bicolor
Sobic.006G118700 5.0kb downstream 5.0kb downstream 11283 true Chr06: 48591356-48602638 Sorghum bicolor
Sobic.006G118700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48597639-48602638 Sorghum bicolor
Sobic.006G118700 10.0kb upstream 10.0kb upstream 16283 true Chr06: 48581356-48597638 Sorghum bicolor
Sobic.006G118700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48581356-48591355 Sorghum bicolor
Sobic.006G118700 10.0kb downstream 10.0kb downstream 16283 true Chr06: 48591356-48607638 Sorghum bicolor
Sobic.006G118700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48597639-48607638 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197392 5267 Panicoideae View MSA
124590088 5269 Grass View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.762       Low
cufflinks 5.17       Low
cufflinks 6.972        
cufflinks 8.198        
cufflinks 13.678     High  
cufflinks 8.947        
cufflinks 10.912        
cufflinks 8.383        
cufflinks 14.031     High High
cufflinks 12.092     High  
cufflinks 11.688        
cufflinks 15.109     High High
cufflinks 12.665     High  
cufflinks 10.252        
cufflinks 13.064     High  
cufflinks 8.275        
cufflinks 11.51     High  
cufflinks 11.574     High  
cufflinks 8.178        
cufflinks 13.804     High  
cufflinks 19.035     High High
cufflinks 9.293        
cufflinks 11.575     High  
cufflinks 10.486        
cufflinks 9.007     High  
cufflinks 5.926       Low
cufflinks 11.659     High  
cufflinks 2.946       Low
cufflinks 9.382        
cufflinks 15.065     High High

0 Strain