Gene : Sobic.006G118900 S. bicolor v3.1.1
Defline:  (1 of 4) PTHR11102//PTHR11102:SF99 - SEL-1-LIKE PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1236
Name:  ? Sobic.006G118900 Secondary Identifier:  ? PAC:37946686
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G118900 0.5kb upstream 0.5kb upstream 4477 true Chr06: 48607479-48611955 Sorghum bicolor
Sobic.006G118900 0.5kb upstream 0.5kb upstream 500 false Chr06: 48607479-48607978 Sorghum bicolor
Sobic.006G118900 0.5kb downstream 0.5kb downstream 4477 true Chr06: 48607979-48612455 Sorghum bicolor
Sobic.006G118900 0.5kb downstream 0.5kb downstream 500 false Chr06: 48611956-48612455 Sorghum bicolor
Sobic.006G118900 1.0kb upstream 1.0kb upstream 4977 true Chr06: 48606979-48611955 Sorghum bicolor
Sobic.006G118900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48606979-48607978 Sorghum bicolor
Sobic.006G118900 1.0kb downstream 1.0kb downstream 4977 true Chr06: 48607979-48612955 Sorghum bicolor
Sobic.006G118900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48611956-48612955 Sorghum bicolor
Sobic.006G118900 2.0kb upstream 2.0kb upstream 5977 true Chr06: 48605979-48611955 Sorghum bicolor
Sobic.006G118900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48605979-48607978 Sorghum bicolor
Sobic.006G118900 2.0kb downstream 2.0kb downstream 5977 true Chr06: 48607979-48613955 Sorghum bicolor
Sobic.006G118900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48611956-48613955 Sorghum bicolor
Sobic.006G118900 5.0kb upstream 5.0kb upstream 8977 true Chr06: 48602979-48611955 Sorghum bicolor
Sobic.006G118900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48602979-48607978 Sorghum bicolor
Sobic.006G118900 5.0kb downstream 5.0kb downstream 8977 true Chr06: 48607979-48616955 Sorghum bicolor
Sobic.006G118900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48611956-48616955 Sorghum bicolor
Sobic.006G118900 10.0kb upstream 10.0kb upstream 13977 true Chr06: 48597979-48611955 Sorghum bicolor
Sobic.006G118900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48597979-48607978 Sorghum bicolor
Sobic.006G118900 10.0kb downstream 10.0kb downstream 13977 true Chr06: 48607979-48621955 Sorghum bicolor
Sobic.006G118900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48611956-48621955 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184762 5267 Panicoideae View MSA
124570277 5269 Grass View MSA
122044811 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121345855 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.345       Low
cufflinks 2.988        
cufflinks 10.56     High High
cufflinks 10.742       High
cufflinks 8.572       High
cufflinks 12.479       High
cufflinks 2.557       Low
cufflinks 2.485       Low
cufflinks 5.359        
cufflinks 3.277        
cufflinks 4.877        
cufflinks 5.295        
cufflinks 6.972        
cufflinks 5.236        
cufflinks 7.923        
cufflinks 7.159        
cufflinks 2.992        
cufflinks 2.56       Low
cufflinks 5.662        
cufflinks 4.102        
cufflinks 4.329        
cufflinks 3.416        
cufflinks 4.467        
cufflinks 3.726        
cufflinks 4.868        
cufflinks 2.295       Low
cufflinks 6.11        
cufflinks 2.529       Low
cufflinks 2.099       Low
cufflinks 7.796        

0 Strain