Gene : Sobic.006G121400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR32175//PTHR32175:SF2 - FAMILY NOT NAMED // SURFEIT LOCUS PROTEIN 2 Genomic Order:  1260
Name:  ? Sobic.006G121400 Secondary Identifier:  ? PAC:37947747
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G121400 0.5kb upstream 0.5kb upstream 2879 true Chr06: 48791920-48794798 Sorghum bicolor
Sobic.006G121400 0.5kb upstream 0.5kb upstream 500 false Chr06: 48791920-48792419 Sorghum bicolor
Sobic.006G121400 0.5kb downstream 0.5kb downstream 2879 true Chr06: 48792420-48795298 Sorghum bicolor
Sobic.006G121400 0.5kb downstream 0.5kb downstream 500 false Chr06: 48794799-48795298 Sorghum bicolor
Sobic.006G121400 1.0kb upstream 1.0kb upstream 3379 true Chr06: 48791420-48794798 Sorghum bicolor
Sobic.006G121400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48791420-48792419 Sorghum bicolor
Sobic.006G121400 1.0kb downstream 1.0kb downstream 3379 true Chr06: 48792420-48795798 Sorghum bicolor
Sobic.006G121400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48794799-48795798 Sorghum bicolor
Sobic.006G121400 2.0kb upstream 2.0kb upstream 4379 true Chr06: 48790420-48794798 Sorghum bicolor
Sobic.006G121400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48790420-48792419 Sorghum bicolor
Sobic.006G121400 2.0kb downstream 2.0kb downstream 4379 true Chr06: 48792420-48796798 Sorghum bicolor
Sobic.006G121400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48794799-48796798 Sorghum bicolor
Sobic.006G121400 5.0kb upstream 5.0kb upstream 7379 true Chr06: 48787420-48794798 Sorghum bicolor
Sobic.006G121400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48787420-48792419 Sorghum bicolor
Sobic.006G121400 5.0kb downstream 5.0kb downstream 7379 true Chr06: 48792420-48799798 Sorghum bicolor
Sobic.006G121400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48794799-48799798 Sorghum bicolor
Sobic.006G121400 10.0kb upstream 10.0kb upstream 12379 true Chr06: 48782420-48794798 Sorghum bicolor
Sobic.006G121400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48782420-48792419 Sorghum bicolor
Sobic.006G121400 10.0kb downstream 10.0kb downstream 12379 true Chr06: 48792420-48804798 Sorghum bicolor
Sobic.006G121400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48794799-48804798 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190727 5267 Panicoideae View MSA
124572635 5269 Grass View MSA
122045153 5273 Angiosperm View MSA
121344193 5274 Embryophyte View MSA
123425861 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.417       High
cufflinks 0.637       Low
cufflinks 1.704        
cufflinks 3.931        
cufflinks 3.209        
cufflinks 4.853        
cufflinks 2.387        
cufflinks 0.502       Low
cufflinks 3.884        
cufflinks 4.191        
cufflinks 3.554        
cufflinks 3.312        
cufflinks 2.511        
cufflinks 2.72        
cufflinks 3.343        
cufflinks 2.129        
cufflinks 2.728        
cufflinks 2.774        
cufflinks 1.219       Low
cufflinks 3.183        
cufflinks 5.831       High
cufflinks 4.358        
cufflinks 3.88        
cufflinks 3.818        
cufflinks 1.07       Low
cufflinks 0.391       Low
cufflinks 2.915        
cufflinks 7.922       High
cufflinks 2.247        
cufflinks 4.955        

0 Strain