Gene : Sobic.002G301800 S. bicolor v3.1.1
Defline:  (1 of 81) PF03514 - GRAS domain family (GRAS) Genomic Order:  3094
Name:  ? Sobic.002G301800 Secondary Identifier:  ? PAC:37951541
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G301800 0.5kb upstream 0.5kb upstream 4013 true Chr02: 67823450-67827462 Sorghum bicolor
Sobic.002G301800 0.5kb upstream 0.5kb upstream 500 false Chr02: 67826963-67827462 Sorghum bicolor
Sobic.002G301800 0.5kb downstream 0.5kb downstream 4013 true Chr02: 67822950-67826962 Sorghum bicolor
Sobic.002G301800 0.5kb downstream 0.5kb downstream 500 false Chr02: 67822950-67823449 Sorghum bicolor
Sobic.002G301800 1.0kb upstream 1.0kb upstream 4513 true Chr02: 67823450-67827962 Sorghum bicolor
Sobic.002G301800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 67826963-67827962 Sorghum bicolor
Sobic.002G301800 1.0kb downstream 1.0kb downstream 4513 true Chr02: 67822450-67826962 Sorghum bicolor
Sobic.002G301800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 67822450-67823449 Sorghum bicolor
Sobic.002G301800 2.0kb upstream 2.0kb upstream 5513 true Chr02: 67823450-67828962 Sorghum bicolor
Sobic.002G301800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 67826963-67828962 Sorghum bicolor
Sobic.002G301800 2.0kb downstream 2.0kb downstream 5513 true Chr02: 67821450-67826962 Sorghum bicolor
Sobic.002G301800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 67821450-67823449 Sorghum bicolor
Sobic.002G301800 5.0kb upstream 5.0kb upstream 8513 true Chr02: 67823450-67831962 Sorghum bicolor
Sobic.002G301800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 67826963-67831962 Sorghum bicolor
Sobic.002G301800 5.0kb downstream 5.0kb downstream 8513 true Chr02: 67818450-67826962 Sorghum bicolor
Sobic.002G301800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 67818450-67823449 Sorghum bicolor
Sobic.002G301800 10.0kb upstream 10.0kb upstream 13513 true Chr02: 67823450-67836962 Sorghum bicolor
Sobic.002G301800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 67826963-67836962 Sorghum bicolor
Sobic.002G301800 10.0kb downstream 10.0kb downstream 13513 true Chr02: 67813450-67826962 Sorghum bicolor
Sobic.002G301800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 67813450-67823449 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194962 5267 Panicoideae View MSA
124588326 5269 Grass View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.966        
cufflinks 1.237       Low
cufflinks 7.714        
cufflinks 10.387        
cufflinks 12.723     High  
cufflinks 24.685     High High
cufflinks 4.277        
cufflinks 3.137       Low
cufflinks 23.87     High High
cufflinks 16.745     High  
cufflinks 15.142     High  
cufflinks 11.414        
cufflinks 17.264     High High
cufflinks 8.725        
cufflinks 11.549        
cufflinks 4.443        
cufflinks 3.897       Low
cufflinks 3.512       Low
cufflinks 12.313     High  
cufflinks 6.478        
cufflinks 10.874        
cufflinks 8.446        
cufflinks 8.085        
cufflinks 8.419        
cufflinks 4.929        
cufflinks 2.169       Low
cufflinks 6.931        
cufflinks 14.413     High  
cufflinks 2.671       Low
cufflinks 11.424        

0 Strain