Gene : Sobic.002G296000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31355:SF5 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  3037
Name:  ? Sobic.002G296000 Secondary Identifier:  ? PAC:37953545
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G296000 0.5kb upstream 0.5kb upstream 6293 true Chr02: 67301570-67307862 Sorghum bicolor
Sobic.002G296000 0.5kb upstream 0.5kb upstream 500 false Chr02: 67307363-67307862 Sorghum bicolor
Sobic.002G296000 0.5kb downstream 0.5kb downstream 6293 true Chr02: 67301070-67307362 Sorghum bicolor
Sobic.002G296000 0.5kb downstream 0.5kb downstream 500 false Chr02: 67301070-67301569 Sorghum bicolor
Sobic.002G296000 1.0kb upstream 1.0kb upstream 6793 true Chr02: 67301570-67308362 Sorghum bicolor
Sobic.002G296000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 67307363-67308362 Sorghum bicolor
Sobic.002G296000 1.0kb downstream 1.0kb downstream 6793 true Chr02: 67300570-67307362 Sorghum bicolor
Sobic.002G296000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 67300570-67301569 Sorghum bicolor
Sobic.002G296000 2.0kb upstream 2.0kb upstream 7793 true Chr02: 67301570-67309362 Sorghum bicolor
Sobic.002G296000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 67307363-67309362 Sorghum bicolor
Sobic.002G296000 2.0kb downstream 2.0kb downstream 7793 true Chr02: 67299570-67307362 Sorghum bicolor
Sobic.002G296000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 67299570-67301569 Sorghum bicolor
Sobic.002G296000 5.0kb upstream 5.0kb upstream 10793 true Chr02: 67301570-67312362 Sorghum bicolor
Sobic.002G296000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 67307363-67312362 Sorghum bicolor
Sobic.002G296000 5.0kb downstream 5.0kb downstream 10793 true Chr02: 67296570-67307362 Sorghum bicolor
Sobic.002G296000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 67296570-67301569 Sorghum bicolor
Sobic.002G296000 10.0kb upstream 10.0kb upstream 15793 true Chr02: 67301570-67317362 Sorghum bicolor
Sobic.002G296000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 67307363-67317362 Sorghum bicolor
Sobic.002G296000 10.0kb downstream 10.0kb downstream 15793 true Chr02: 67291570-67307362 Sorghum bicolor
Sobic.002G296000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 67291570-67301569 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181635 5267 Panicoideae View MSA
124584096 5269 Grass View MSA
122044340 5273 Angiosperm View MSA
121344620 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.605        
cufflinks 0.091       Low
cufflinks 0.131       Low
cufflinks 0.081       Low
cufflinks 13.477     High High
cufflinks 0.245        
cufflinks 8.908        
cufflinks 0.332        
cufflinks 0.431        
cufflinks 1.108        
cufflinks 5.848        
cufflinks 3.855        
cufflinks 0.58        
cufflinks 3.977        
cufflinks 2.53        
cufflinks 0.141       Low
cufflinks 8.357        
cufflinks 9.443       High
cufflinks 0.176       Low
cufflinks 5.41        
cufflinks 45.819     High High
cufflinks 3.479        
cufflinks 5.071        
cufflinks 5.767        
cufflinks 0.096       Low
cufflinks 0.066       Low
cufflinks 1.543        
cufflinks 0.061     Low Low
cufflinks 0.254        
cufflinks 3.564        

0 Strain