Gene : Sobic.006G126900 S. bicolor v3.1.1
Defline:  (1 of 2) K14297 - nuclear pore complex protein Nup98-Nup96 (NUP98, ADAR2, NUP116) Genomic Order:  1318
Name:  ? Sobic.006G126900 Secondary Identifier:  ? PAC:37947667
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G126900 0.5kb upstream 0.5kb upstream 6492 true Chr06: 49201258-49207749 Sorghum bicolor
Sobic.006G126900 0.5kb upstream 0.5kb upstream 500 false Chr06: 49201258-49201757 Sorghum bicolor
Sobic.006G126900 0.5kb downstream 0.5kb downstream 6492 true Chr06: 49201758-49208249 Sorghum bicolor
Sobic.006G126900 0.5kb downstream 0.5kb downstream 500 false Chr06: 49207750-49208249 Sorghum bicolor
Sobic.006G126900 1.0kb upstream 1.0kb upstream 6992 true Chr06: 49200758-49207749 Sorghum bicolor
Sobic.006G126900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49200758-49201757 Sorghum bicolor
Sobic.006G126900 1.0kb downstream 1.0kb downstream 6992 true Chr06: 49201758-49208749 Sorghum bicolor
Sobic.006G126900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49207750-49208749 Sorghum bicolor
Sobic.006G126900 2.0kb upstream 2.0kb upstream 7992 true Chr06: 49199758-49207749 Sorghum bicolor
Sobic.006G126900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49199758-49201757 Sorghum bicolor
Sobic.006G126900 2.0kb downstream 2.0kb downstream 7992 true Chr06: 49201758-49209749 Sorghum bicolor
Sobic.006G126900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49207750-49209749 Sorghum bicolor
Sobic.006G126900 5.0kb upstream 5.0kb upstream 10992 true Chr06: 49196758-49207749 Sorghum bicolor
Sobic.006G126900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49196758-49201757 Sorghum bicolor
Sobic.006G126900 5.0kb downstream 5.0kb downstream 10992 true Chr06: 49201758-49212749 Sorghum bicolor
Sobic.006G126900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49207750-49212749 Sorghum bicolor
Sobic.006G126900 10.0kb upstream 10.0kb upstream 15992 true Chr06: 49191758-49207749 Sorghum bicolor
Sobic.006G126900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49191758-49201757 Sorghum bicolor
Sobic.006G126900 10.0kb downstream 10.0kb downstream 15992 true Chr06: 49201758-49217749 Sorghum bicolor
Sobic.006G126900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49207750-49217749 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199218 5267 Panicoideae View MSA
124574361 5269 Grass View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.011     High Low
cufflinks 8.596     High Low
cufflinks 16.474     High  
cufflinks 20.318     High  
cufflinks 28.277     High  
cufflinks 16.747     High  
cufflinks 25.322     High  
cufflinks 15.044     High  
cufflinks 36.44     High High
cufflinks 42.959     High High
cufflinks 30.498     High  
cufflinks 27.45     High  
cufflinks 29.679     High  
cufflinks 21.446     High  
cufflinks 27.162     High  
cufflinks 9.921     High Low
cufflinks 22.58     High  
cufflinks 23.197     High  
cufflinks 35.778     High High
cufflinks 20.573     High  
cufflinks 45.124     High High
cufflinks 23.039     High  
cufflinks 28.372     High  
cufflinks 30.499     High  
cufflinks 12.81     High Low
cufflinks 10.12     High Low
cufflinks 16.483     High  
cufflinks 8.474       Low
cufflinks 22.553     High  
cufflinks 28.26     High  

0 Strain