Gene : Sobic.002G291600 S. bicolor v3.1.1
Defline:  similar to Chromosome chr13 scaffold_149, whole genome shotgun sequence Genomic Order:  2990
Name:  ? Sobic.002G291600 Secondary Identifier:  ? PAC:37954965
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G291600 0.5kb upstream 0.5kb upstream 2575 true Chr02: 66983370-66985944 Sorghum bicolor
Sobic.002G291600 0.5kb upstream 0.5kb upstream 500 false Chr02: 66983370-66983869 Sorghum bicolor
Sobic.002G291600 0.5kb downstream 0.5kb downstream 2575 true Chr02: 66983870-66986444 Sorghum bicolor
Sobic.002G291600 0.5kb downstream 0.5kb downstream 500 false Chr02: 66985945-66986444 Sorghum bicolor
Sobic.002G291600 1.0kb upstream 1.0kb upstream 3075 true Chr02: 66982870-66985944 Sorghum bicolor
Sobic.002G291600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 66982870-66983869 Sorghum bicolor
Sobic.002G291600 1.0kb downstream 1.0kb downstream 3075 true Chr02: 66983870-66986944 Sorghum bicolor
Sobic.002G291600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 66985945-66986944 Sorghum bicolor
Sobic.002G291600 2.0kb upstream 2.0kb upstream 4075 true Chr02: 66981870-66985944 Sorghum bicolor
Sobic.002G291600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 66981870-66983869 Sorghum bicolor
Sobic.002G291600 2.0kb downstream 2.0kb downstream 4075 true Chr02: 66983870-66987944 Sorghum bicolor
Sobic.002G291600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 66985945-66987944 Sorghum bicolor
Sobic.002G291600 5.0kb upstream 5.0kb upstream 7075 true Chr02: 66978870-66985944 Sorghum bicolor
Sobic.002G291600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 66978870-66983869 Sorghum bicolor
Sobic.002G291600 5.0kb downstream 5.0kb downstream 7075 true Chr02: 66983870-66990944 Sorghum bicolor
Sobic.002G291600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 66985945-66990944 Sorghum bicolor
Sobic.002G291600 10.0kb upstream 10.0kb upstream 12075 true Chr02: 66973870-66985944 Sorghum bicolor
Sobic.002G291600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 66973870-66983869 Sorghum bicolor
Sobic.002G291600 10.0kb downstream 10.0kb downstream 12075 true Chr02: 66983870-66995944 Sorghum bicolor
Sobic.002G291600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 66985945-66995944 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181542 5267 Panicoideae View MSA
124589147 5269 Grass View MSA
122044974 5273 Angiosperm View MSA
121347756 5274 Embryophyte View MSA
123380616 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.224        
cufflinks 2.284       Low
cufflinks 5.707        
cufflinks 8.059       High
cufflinks 4.333        
cufflinks 6.592        
cufflinks 5.174        
cufflinks 3.413       Low
cufflinks 7.911       High
cufflinks 7.457       High
cufflinks 4.002        
cufflinks 5.76        
cufflinks 8.274       High
cufflinks 6.434        
cufflinks 8.0       High
cufflinks 7.513       High
cufflinks 5.959        
cufflinks 5.124        
cufflinks 5.176        
cufflinks 7.885       High
cufflinks 3.622       Low
cufflinks 5.575        
cufflinks 5.731        
cufflinks 6.298        
cufflinks 4.107        
cufflinks 2.288       Low
cufflinks 4.982        
cufflinks 10.6     High High
cufflinks 4.393        
cufflinks 7.233        

0 Strain