Gene : Sobic.006G182900 S. bicolor v3.1.1
Defline:  (1 of 7) PF05664 - Plant family of unknown function (DUF810) (DUF810) Genomic Order:  1907
Name:  ? Sobic.006G182900 Secondary Identifier:  ? PAC:37948267
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G182900 0.5kb upstream 0.5kb upstream 18881 true Chr06: 53783513-53802393 Sorghum bicolor
Sobic.006G182900 0.5kb upstream 0.5kb upstream 500 false Chr06: 53801894-53802393 Sorghum bicolor
Sobic.006G182900 0.5kb downstream 0.5kb downstream 18881 true Chr06: 53783013-53801893 Sorghum bicolor
Sobic.006G182900 0.5kb downstream 0.5kb downstream 500 false Chr06: 53783013-53783512 Sorghum bicolor
Sobic.006G182900 1.0kb upstream 1.0kb upstream 19381 true Chr06: 53783513-53802893 Sorghum bicolor
Sobic.006G182900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 53801894-53802893 Sorghum bicolor
Sobic.006G182900 1.0kb downstream 1.0kb downstream 19381 true Chr06: 53782513-53801893 Sorghum bicolor
Sobic.006G182900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 53782513-53783512 Sorghum bicolor
Sobic.006G182900 2.0kb upstream 2.0kb upstream 20381 true Chr06: 53783513-53803893 Sorghum bicolor
Sobic.006G182900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 53801894-53803893 Sorghum bicolor
Sobic.006G182900 2.0kb downstream 2.0kb downstream 20381 true Chr06: 53781513-53801893 Sorghum bicolor
Sobic.006G182900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 53781513-53783512 Sorghum bicolor
Sobic.006G182900 5.0kb upstream 5.0kb upstream 23381 true Chr06: 53783513-53806893 Sorghum bicolor
Sobic.006G182900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 53801894-53806893 Sorghum bicolor
Sobic.006G182900 5.0kb downstream 5.0kb downstream 23381 true Chr06: 53778513-53801893 Sorghum bicolor
Sobic.006G182900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 53778513-53783512 Sorghum bicolor
Sobic.006G182900 10.0kb upstream 10.0kb upstream 28381 true Chr06: 53783513-53811893 Sorghum bicolor
Sobic.006G182900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 53801894-53811893 Sorghum bicolor
Sobic.006G182900 10.0kb downstream 10.0kb downstream 28381 true Chr06: 53773513-53801893 Sorghum bicolor
Sobic.006G182900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 53773513-53783512 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176107 5267 Panicoideae View MSA
124581370 5269 Grass View MSA
122045218 5273 Angiosperm View MSA
121344209 5274 Embryophyte View MSA
123427931 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.526       Low
cufflinks 1.918        
cufflinks 3.814        
cufflinks 3.651        
cufflinks 5.034       High
cufflinks 4.786       High
cufflinks 1.761        
cufflinks 1.75        
cufflinks 5.84       High
cufflinks 5.399       High
cufflinks 2.317        
cufflinks 2.814        
cufflinks 4.025        
cufflinks 1.898        
cufflinks 3.082        
cufflinks 2.008        
cufflinks 1.749        
cufflinks 1.733        
cufflinks 3.439        
cufflinks 2.499        
cufflinks 4.566       High
cufflinks 1.516       Low
cufflinks 1.832        
cufflinks 1.724        
cufflinks 4.447       High
cufflinks 2.333        
cufflinks 4.052        
cufflinks 2.722        
cufflinks 1.547       Low
cufflinks 3.407        

0 Strain