Gene : Sobic.002G420600 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11782//PTHR11782:SF48 - ADENOSINE/GUANOSINE DIPHOSPHATASE // SUBFAMILY NOT NAMED Genomic Order:  4303
Name:  ? Sobic.002G420600 Secondary Identifier:  ? PAC:37952873
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6545 Sorghum bicolor pathologic  
Sbicolor PWY-7177 Sorghum bicolor pathologic  
Sbicolor PWY-7184 Sorghum bicolor pathologic  
Sbicolor PWY-7185 Sorghum bicolor pathologic  
Sbicolor PWY-7210 Sorghum bicolor pathologic  
Sbicolor PWY-7211 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G420600 0.5kb upstream 0.5kb upstream 4354 true Chr02: 76795305-76799658 Sorghum bicolor
Sobic.002G420600 0.5kb upstream 0.5kb upstream 500 false Chr02: 76795305-76795804 Sorghum bicolor
Sobic.002G420600 0.5kb downstream 0.5kb downstream 4354 true Chr02: 76795805-76800158 Sorghum bicolor
Sobic.002G420600 0.5kb downstream 0.5kb downstream 500 false Chr02: 76799659-76800158 Sorghum bicolor
Sobic.002G420600 1.0kb upstream 1.0kb upstream 4854 true Chr02: 76794805-76799658 Sorghum bicolor
Sobic.002G420600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 76794805-76795804 Sorghum bicolor
Sobic.002G420600 1.0kb downstream 1.0kb downstream 4854 true Chr02: 76795805-76800658 Sorghum bicolor
Sobic.002G420600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 76799659-76800658 Sorghum bicolor
Sobic.002G420600 2.0kb upstream 2.0kb upstream 5854 true Chr02: 76793805-76799658 Sorghum bicolor
Sobic.002G420600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 76793805-76795804 Sorghum bicolor
Sobic.002G420600 2.0kb downstream 2.0kb downstream 5854 true Chr02: 76795805-76801658 Sorghum bicolor
Sobic.002G420600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 76799659-76801658 Sorghum bicolor
Sobic.002G420600 5.0kb upstream 5.0kb upstream 8854 true Chr02: 76790805-76799658 Sorghum bicolor
Sobic.002G420600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 76790805-76795804 Sorghum bicolor
Sobic.002G420600 5.0kb downstream 5.0kb downstream 8854 true Chr02: 76795805-76804658 Sorghum bicolor
Sobic.002G420600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 76799659-76804658 Sorghum bicolor
Sobic.002G420600 10.0kb upstream 10.0kb upstream 13854 true Chr02: 76785805-76799658 Sorghum bicolor
Sobic.002G420600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 76785805-76795804 Sorghum bicolor
Sobic.002G420600 10.0kb downstream 10.0kb downstream 13854 true Chr02: 76795805-76809658 Sorghum bicolor
Sobic.002G420600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 76799659-76809658 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180180 5267 Panicoideae View MSA
124569171 5269 Grass View MSA
122045762 5273 Angiosperm View MSA
121344433 5274 Embryophyte View MSA
123426317 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.613     High  
cufflinks 0.747       Low
cufflinks 8.872        
cufflinks 6.838        
cufflinks 17.546     High  
cufflinks 5.029        
cufflinks 8.445        
cufflinks 3.069       Low
cufflinks 5.1        
cufflinks 5.947        
cufflinks 17.818     High  
cufflinks 16.957     High  
cufflinks 14.838     High  
cufflinks 19.407     High  
cufflinks 13.686     High  
cufflinks 2.334       Low
cufflinks 9.795        
cufflinks 9.047        
cufflinks 3.561       Low
cufflinks 10.978        
cufflinks 11.82        
cufflinks 19.018     High  
cufflinks 21.945     High  
cufflinks 21.999     High  
cufflinks 2.014       Low
cufflinks 0.87       Low
cufflinks 18.813     High  
cufflinks 1.165       Low
cufflinks 12.207     High  
cufflinks 11.806        

0 Strain