Gene : Sobic.002G422100 S. bicolor v3.1.1
Defline:  (1 of 1) K14317 - nuclear pore complex protein Nup214 (NUP214, CAN) Genomic Order:  4319
Name:  ? Sobic.002G422100 Secondary Identifier:  ? PAC:37953388
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G422100 0.5kb upstream 0.5kb upstream 12865 true Chr02: 76947466-76960330 Sorghum bicolor
Sobic.002G422100 0.5kb upstream 0.5kb upstream 500 false Chr02: 76959831-76960330 Sorghum bicolor
Sobic.002G422100 0.5kb downstream 0.5kb downstream 12865 true Chr02: 76946966-76959830 Sorghum bicolor
Sobic.002G422100 0.5kb downstream 0.5kb downstream 500 false Chr02: 76946966-76947465 Sorghum bicolor
Sobic.002G422100 1.0kb upstream 1.0kb upstream 13365 true Chr02: 76947466-76960830 Sorghum bicolor
Sobic.002G422100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 76959831-76960830 Sorghum bicolor
Sobic.002G422100 1.0kb downstream 1.0kb downstream 13365 true Chr02: 76946466-76959830 Sorghum bicolor
Sobic.002G422100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 76946466-76947465 Sorghum bicolor
Sobic.002G422100 2.0kb upstream 2.0kb upstream 14365 true Chr02: 76947466-76961830 Sorghum bicolor
Sobic.002G422100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 76959831-76961830 Sorghum bicolor
Sobic.002G422100 2.0kb downstream 2.0kb downstream 14365 true Chr02: 76945466-76959830 Sorghum bicolor
Sobic.002G422100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 76945466-76947465 Sorghum bicolor
Sobic.002G422100 5.0kb upstream 5.0kb upstream 17365 true Chr02: 76947466-76964830 Sorghum bicolor
Sobic.002G422100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 76959831-76964830 Sorghum bicolor
Sobic.002G422100 5.0kb downstream 5.0kb downstream 17365 true Chr02: 76942466-76959830 Sorghum bicolor
Sobic.002G422100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 76942466-76947465 Sorghum bicolor
Sobic.002G422100 10.0kb upstream 10.0kb upstream 22365 true Chr02: 76947466-76969830 Sorghum bicolor
Sobic.002G422100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 76959831-76969830 Sorghum bicolor
Sobic.002G422100 10.0kb downstream 10.0kb downstream 22365 true Chr02: 76937466-76959830 Sorghum bicolor
Sobic.002G422100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 76937466-76947465 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185966 5267 Panicoideae View MSA
124581571 5269 Grass View MSA
122042091 5273 Angiosperm View MSA
121347011 5274 Embryophyte View MSA
123424066 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.174        
cufflinks 0.352       Low
cufflinks 0.946       Low
cufflinks 1.207        
cufflinks 5.207       High
cufflinks 1.986        
cufflinks 2.392        
cufflinks 0.657       Low
cufflinks 3.76        
cufflinks 3.705        
cufflinks 2.348        
cufflinks 3.007        
cufflinks 2.833        
cufflinks 2.248        
cufflinks 2.669        
cufflinks 0.618       Low
cufflinks 2.09        
cufflinks 2.329        
cufflinks 1.463        
cufflinks 2.083        
cufflinks 9.904       High
cufflinks 2.396        
cufflinks 2.744        
cufflinks 2.84        
cufflinks 0.906       Low
cufflinks 0.434       Low
cufflinks 2.191        
cufflinks 3.002        
cufflinks 1.55        
cufflinks 4.011        

0 Strain