Gene : Sobic.002G411500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR30540//PTHR30540:SF32 - OSMOTIC STRESS POTASSIUM TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  4212
Name:  ? Sobic.002G411500 Secondary Identifier:  ? PAC:37951111
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G411500 0.5kb upstream 0.5kb upstream 6646 true Chr02: 75976742-75983387 Sorghum bicolor
Sobic.002G411500 0.5kb upstream 0.5kb upstream 500 false Chr02: 75982888-75983387 Sorghum bicolor
Sobic.002G411500 0.5kb downstream 0.5kb downstream 6646 true Chr02: 75976242-75982887 Sorghum bicolor
Sobic.002G411500 0.5kb downstream 0.5kb downstream 500 false Chr02: 75976242-75976741 Sorghum bicolor
Sobic.002G411500 1.0kb upstream 1.0kb upstream 7146 true Chr02: 75976742-75983887 Sorghum bicolor
Sobic.002G411500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 75982888-75983887 Sorghum bicolor
Sobic.002G411500 1.0kb downstream 1.0kb downstream 7146 true Chr02: 75975742-75982887 Sorghum bicolor
Sobic.002G411500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 75975742-75976741 Sorghum bicolor
Sobic.002G411500 2.0kb upstream 2.0kb upstream 8146 true Chr02: 75976742-75984887 Sorghum bicolor
Sobic.002G411500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 75982888-75984887 Sorghum bicolor
Sobic.002G411500 2.0kb downstream 2.0kb downstream 8146 true Chr02: 75974742-75982887 Sorghum bicolor
Sobic.002G411500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 75974742-75976741 Sorghum bicolor
Sobic.002G411500 5.0kb upstream 5.0kb upstream 11146 true Chr02: 75976742-75987887 Sorghum bicolor
Sobic.002G411500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 75982888-75987887 Sorghum bicolor
Sobic.002G411500 5.0kb downstream 5.0kb downstream 11146 true Chr02: 75971742-75982887 Sorghum bicolor
Sobic.002G411500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 75971742-75976741 Sorghum bicolor
Sobic.002G411500 10.0kb upstream 10.0kb upstream 16146 true Chr02: 75976742-75992887 Sorghum bicolor
Sobic.002G411500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 75982888-75992887 Sorghum bicolor
Sobic.002G411500 10.0kb downstream 10.0kb downstream 16146 true Chr02: 75966742-75982887 Sorghum bicolor
Sobic.002G411500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 75966742-75976741 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182354 5267 Panicoideae View MSA
124575151 5269 Grass View MSA
122050698 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121349453 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.095     High  
cufflinks 18.762     High  
cufflinks 42.133     High  
cufflinks 53.389     High High
cufflinks 42.525     High  
cufflinks 17.095     High  
cufflinks 3.199       Low
cufflinks 13.421     High  
cufflinks 16.577     High  
cufflinks 21.899     High  
cufflinks 31.274     High  
cufflinks 32.566     High  
cufflinks 36.232     High  
cufflinks 33.332     High  
cufflinks 38.073     High  
cufflinks 20.819     High  
cufflinks 3.266       Low
cufflinks 3.042       Low
cufflinks 30.203     High  
cufflinks 4.943       Low
cufflinks 2.547       Low
cufflinks 13.675     High  
cufflinks 23.055     High  
cufflinks 22.051     High  
cufflinks 22.262     High  
cufflinks 9.225     High  
cufflinks 40.918     High  
cufflinks 5.174       Low
cufflinks 7.711        
cufflinks 27.937     High  

0 Strain